RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 LRRC53A6NM62 1247 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 FAM72CH0Y354 149 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 PRAMEF26H0Y7S4 382 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 H0Y8X5 98 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 TLR4O00206 839 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 PLK4O00444 970 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 KPNA3O00505 521 aaPredicted RBP4.88□□□□□ -1.63
CLK3-219ENST00000567805 YKT6O15498 198 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 CCP110O43303 1012 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 SMAD6O43541 496 aaKnown RBP4.88□□□□□ -1.63
CLK3-219ENST00000567805 HYAL3O43820 417 aaPredicted RBP4.88□□□□□ -1.63
CLK3-219ENST00000567805 MAGEC1O60732 1142 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 RAMP2O60895 175 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 RNGTTO60942 597 aaKnown RBP4.88□□□□□ -1.63
CLK3-219ENST00000567805 RTN2O75298 545 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 ZNF821O75541 412 aaPredicted RBP4.88□□□□□ -1.63
CLK3-219ENST00000567805 LEFTY1O75610 366 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 ZMPSTE24O75844 475 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 LRIG2O94898 1065 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 SERPINC1P01008 464 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 WNT1P04628 370 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 PROS1P07225 676 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 CTSLP07711 333 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 FTH1P19P0C7X4 201 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 GZMAP12544 262 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 TNFAIP3P21580 790 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 ITGB7P26010 798 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 MAT2AP31153 395 aaKnown RBP4.88□□□□□ -1.63
CLK3-219ENST00000567805 L1CAMP32004 1257 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 HTR7P34969 479 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 ACVRL1P37023 503 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 PRKCIP41743 596 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 TAS2R38P59533 333 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 RPL7AP62424 266 aaKnown RBP4.88□□□□□ -1.63
CLK3-219ENST00000567805 PPP2CBP62714 309 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 PPP2CAP67775 309 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 TPM4P67936 248 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 ARF5P84085 180 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 OVGP1Q12889 678 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 STAT4Q14765 748 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 IQCB1Q15051 598 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 POLD3Q15054 466 aaPredicted RBP4.88□□□□□ -1.63
CLK3-219ENST00000567805 ASIC2Q16515 512 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 ST3GAL2Q16842 350 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 KLHL40Q2TBA0 621 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 POM121L1PQ3SYA9 428 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 FIGNQ5HY92 759 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 EFHC2Q5JST6 749 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 KCNT1Q5JUK3 1230 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 PIP5KL1Q5T9C9 394 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 FAM72AQ5TYM5 149 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 SFMBT2Q5VUG0 894 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 ZNF787Q6DD87 383 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 NAPEPLDQ6IQ20 393 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 FAM72DQ6L9T8 149 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 SCYL2Q6P3W7 929 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 DCUN1D2Q6PH85 259 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 UNQ6494/PRO21346Q6UXR6 183 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 DPY19L3Q6ZPD9 716 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 ERN2Q76MJ5 926 aaKnown RBP4.88□□□□□ -1.63
CLK3-219ENST00000567805 IQCHQ86VS3 1027 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 FAM72BQ86X60 149 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 MCOLN2Q8IZK6 566 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 OXR1Q8N573 874 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 MFSD2AQ8NA29 543 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 BAHD1Q8TBE0 780 aaPredicted RBP4.88□□□□□ -1.63
CLK3-219ENST00000567805 GRIN3AQ8TCU5 1115 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 RHBDD1Q8TEB9 315 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 ADAMTS14Q8WXS8 1223 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 GATA6Q92908 595 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 ARHGEF2Q92974 986 aaKnown RBP4.88□□□□□ -1.63
CLK3-219ENST00000567805 ISG20Q96AZ6 181 aaKnown RBP4.88□□□□□ -1.63
CLK3-219ENST00000567805 ZNF775Q96BV0 537 aaPredicted RBP4.88□□□□□ -1.63
CLK3-219ENST00000567805 LRIG1Q96JA1 1093 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 ELF4Q99607 663 aaPredicted RBP4.88□□□□□ -1.63
CLK3-219ENST00000567805 EPAS1Q99814 870 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 HEPHQ9BQS7 1158 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 SYT11Q9BT88 431 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 FUCA2Q9BTY2 467 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 HDAC8Q9BY41 377 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 EDEM3Q9BZQ6 932 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 TNKS2Q9H2K2 1166 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 CATSPERBQ9H7T0 1116 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 ERVMER34-1Q9H9K5 563 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 NPDC1Q9NQX5 325 aaPredicted RBP4.88□□□□□ -1.63
CLK3-219ENST00000567805 GDF3Q9NR23 364 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 NDFIP2Q9NV92 336 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 PARVAQ9NVD7 372 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 DONSONQ9NYP3 566 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 AIPL1Q9NZN9 384 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 DNAI1Q9UI46 699 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 APOBEC2Q9Y235 224 aaKnown RBP4.88□□□□□ -1.63
CLK3-219ENST00000567805 MSRB2Q9Y3D2 182 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 TDRD6O60522 2096 aaKnown RBP4.88□□□□□ -1.63
CLK3-219ENST00000567805 CHD8Q9HCK8 2581 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 MYLKQ15746 1914 aa4.87□□□□□ -1.63
CLK3-219ENST00000567805 SHROOM3Q8TF72 1996 aa4.87□□□□□ -1.63
CLK3-219ENST00000567805 CELSR3Q9NYQ7 3312 aa4.87□□□□□ -1.63
CLK3-219ENST00000567805 ACACBO00763 2458 aa4.87□□□□□ -1.63
CLK3-219ENST00000567805 CABIN1Q9Y6J0 2220 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms