RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	RAMP2	O60895	175 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	RNGTT	O60942	597 aa	Known RBP	7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	CBFA2T3	O75081	653 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	ZNF821	O75541	412 aa	Predicted RBP	7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	LEFTY1	O75610	366 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	TRIM16	O95361	564 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	POP4	O95707	220 aa	Known RBP	7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	TOP3B	O95985	862 aa	Known RBP	7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	WNT1	P04628	370 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	SKIL	P12757	684 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	EPHB2	P29323	1055 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	MAT2A	P31153	395 aa	Known RBP	7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	PRKCI	P41743	596 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	SERPINH1	P50454	418 aa	Known RBP	7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	UBASH3A	P57075	661 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	YBEY	P58557	167 aa	Predicted RBP	7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	TAS2R38	P59533	333 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	PPP2CB	P62714	309 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	PPP2CA	P67775	309 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	ARF5	P84085	180 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	FANCC	Q00597	558 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	STAT4	Q14765	748 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	MYLK3	Q32MK0	819 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	SETMAR	Q53H47	684 aa	Predicted RBP	7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	FIGN	Q5HY92	759 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	PIP5KL1	Q5T9C9	394 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	AGBL4	Q5VU57	503 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	NAPEPLD	Q6IQ20	393 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	PLEKHA7	Q6IQ23	1121 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	FBXL19	Q6PCT2	694 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	LAYN	Q6UX15	382 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	ERN2	Q76MJ5	926 aa	Known RBP	7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	TMC6	Q7Z403	805 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	GLRX5	Q86SX6	157 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	LUZP1	Q86V48	1076 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	IQCH	Q86VS3	1027 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	PCDH20	Q8N6Y1	951 aa	Known RBP	7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	MFSD2A	Q8NA29	543 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	SYN2	Q92777	582 aa	Predicted RBP	7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	ARRDC3	Q96B67	414 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	PPP1R16A	Q96I34	528 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	SLC6A18	Q96N87	628 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	EPAS1	Q99814	870 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	SCNM1	Q9BWG6	230 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	HDAC8	Q9BY41	377 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	ZMYND15	Q9H091	742 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	CATSPERB	Q9H7T0	1116 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	PREB	Q9HCU5	417 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	DONSON	Q9NYP3	566 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	ARHGAP20	Q9P2F6	1191 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	HECA	Q9UBI9	543 aa	Predicted RBP	7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	METRN	Q9UJH8	293 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	DMTF1	Q9Y222	760 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	APOBEC2	Q9Y235	224 aa	Known RBP	7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	FCF1	Q9Y324	198 aa	Known RBP	7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	BZW2	Q9Y6E2	419 aa	Known RBP	7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	IGF2R	P11717	2491 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	RP1	P56715	2156 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	UNC13C	Q8NB66	2214 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635		A0A1B0GTQ1	180 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635		A0A1W2PQJ5	194 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635		A0A1W2PQU0	124 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	WASH4P	A8MWX3	477 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	EIF3CL	B5ME19	914 aa	Known RBP	7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	PRAMEF26	H0Y7S4	382 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	RNF103	O00237	685 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	DDX3X	O00571	662 aa	Known RBP eCLIP	7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	SLC31A1	O15431	190 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	FGF10	O15520	208 aa	Predicted RBP	7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	BUB1	O43683	1085 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	HYAL3	O43820	417 aa	Predicted RBP	7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	MAGEC1	O60732	1142 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	RNF8	O76064	485 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	PCDH8	O95206	1070 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	CD160	O95971	181 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	MYBL1	P10243	752 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	SPINK2	P20155	84 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	PSMA2	P25787	234 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	ITGB7	P26010	798 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	HTR7	P34969	479 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	GRK6	P43250	576 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	CCT8	P50990	548 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	CCNH	P51946	323 aa	Predicted RBP	7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	SNRPD1	P62314	119 aa	Known RBP	7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	OGDH	Q02218	1023 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	OVGP1	Q12889	678 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	ZNF284	Q2VY69	593 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	PRAMEF14	Q5SWL7	426 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	ERMARD	Q5T6L9	678 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	LEKR1	Q6ZMV7	388 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	SLCO6A1	Q86UG4	719 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	HORMAD1	Q86X24	394 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	ZNF354C	Q86Y25	554 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	DNAAF5	Q86Y56	855 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	HOMEZ	Q8IX15	550 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	UMODL1-AS1	Q8N2C9	162 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	RYBP	Q8N488	228 aa	Predicted RBP	7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	CHCHD4	Q8N4Q1	142 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	RTL3	Q8N8U3	475 aa	Known RBP	7.04	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms