RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 SAGE1Q9NXZ1 904 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 DRG1Q9Y295 367 aaKnown RBP6.3□□□□□ -1.4
CDH13-209ENST00000567109 A0A087WXM4 84 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 H3BM21 787 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 ADH1CP00326 375 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 ATP6V1B2P21281 511 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 ALAS2P22557 587 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 ATP5F1P24539 256 aaPredicted RBP6.3□□□□□ -1.4
CDH13-209ENST00000567109 SERPINB5P36952 375 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 TGFBR2P37173 567 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 RPL5P46777 297 aaKnown RBP6.3□□□□□ -1.4
CDH13-209ENST00000567109 RTP1P59025 263 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 NAB1Q13506 487 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 CHI3L2Q15782 390 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 FSCN1Q16658 493 aaKnown RBP6.3□□□□□ -1.4
CDH13-209ENST00000567109 EMC10Q5UCC4 262 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 PRMT9Q6P2P2 845 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 TLK2Q86UE8 772 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 FAM124AQ86V42 546 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 SMYD1Q8NB12 490 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 OR52L1Q8NGH7 329 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 C1orf50Q9BV19 199 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 ANKZF1Q9H8Y5 726 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 HCN3Q9P1Z3 774 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 SHOC2Q9UQ13 582 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 TSC22D4Q9Y3Q8 395 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 RPS6KL1Q9Y6S9 549 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 ERI2A8K979 691 aaKnown RBP6.3□□□□□ -1.4
CDH13-209ENST00000567109 IGF2BP3O00425 579 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDH13-209ENST00000567109 DNTTP04053 509 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 TFPIP10646 304 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 CXCR2P25025 360 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 RXRGP48443 463 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 TUFMP49411 452 aaKnown RBP6.3□□□□□ -1.4
CDH13-209ENST00000567109 SLC7A2P52569 658 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 AP1S2P56377 157 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 SCRN3Q0VDG4 424 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 MKRN4PQ13434 485 aaPredicted RBP6.3□□□□□ -1.4
CDH13-209ENST00000567109 TRIM25Q14258 630 aaKnown RBP6.3□□□□□ -1.4
CDH13-209ENST00000567109 TRIM16LQ309B1 348 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 PAGE2BQ5JRK9 111 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 EID3Q8N140 333 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 ZNF563Q8TA94 476 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 FEZF2Q8TBJ5 459 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 RASSF5Q8WWW0 418 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 SLC9A6Q92581 669 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 SHCBP1LQ9BZQ2 653 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 DDX43Q9NXZ2 648 aaKnown RBP6.3□□□□□ -1.4
CDH13-209ENST00000567109 SRRDQ9UH36 339 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 PCDHGC5Q9Y5F6 944 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 ASTN2O75129 1339 aaPredicted RBP6.3□□□□□ -1.4
CDH13-209ENST00000567109 THSD7AQ9UPZ6 1657 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 KLHL33A6NCF5 533 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 SERPINH1P50454 418 aaKnown RBP6.3□□□□□ -1.4
CDH13-209ENST00000567109 NR1H2P55055 460 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 PTSQ03393 145 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 BLMHQ13867 455 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 PLPP4Q5VZY2 271 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 SHC4Q6S5L8 630 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 P4HA3Q7Z4N8 544 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 PTAR1Q7Z6K3 402 aaPredicted RBP6.3□□□□□ -1.4
CDH13-209ENST00000567109 GALNT7Q86SF2 657 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 TMEM132CQ8N3T6 1108 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.3□□□□□ -1.4
CDH13-209ENST00000567109 PDPRQ8NCN5 879 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 PXYLP1Q8TE99 480 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 S100ZQ8WXG8 99 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 SMARCD1Q96GM5 515 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 KLHL4Q9C0H6 718 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 TLE6Q9H808 572 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 RASSF1Q9NS23 344 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 MRTO4Q9UKD2 239 aaKnown RBP6.3□□□□□ -1.4
CDH13-209ENST00000567109 TRIM24O15164 1050 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 SGTAO43765 313 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 RAMP2O60895 175 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 SNRPAP09012 282 aaKnown RBP6.3□□□□□ -1.4
CDH13-209ENST00000567109 ZNF12P17014 697 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 EIF4BP23588 611 aaKnown RBP6.3□□□□□ -1.4
CDH13-209ENST00000567109 PTENP60484 403 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 SNRPD1P62314 119 aaKnown RBP6.3□□□□□ -1.4
CDH13-209ENST00000567109 TFDP3Q5H9I0 405 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 ERMARDQ5T6L9 678 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 KLHL35Q6PF15 583 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 SLC30A10Q6XR72 485 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 ZNF410Q86VK4 478 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 PROSER1Q86XN7 944 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 KRT73Q86Y46 540 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 CPA6Q8N4T0 437 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 OSMRQ99650 979 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 KCTD14Q9BQ13 255 aaPredicted RBP6.3□□□□□ -1.4
CDH13-209ENST00000567109 NIF3L1Q9GZT8 377 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 LDAHQ9H6V9 325 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 SLC12A4Q9UP95 1085 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 PCDHA11Q9Y5I1 949 aa6.3□□□□□ -1.4
CDH13-209ENST00000567109 MFN2O95140 757 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 RAB2AP61019 212 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 GRB10Q13322 594 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 OLFML2BQ68BL8 750 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 GPR135Q8IZ08 494 aa6.29□□□□□ -1.4
CDH13-209ENST00000567109 MS4A14Q96JA4 679 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms