RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 CLDN11O75508 207 aa11.52□□□□□ -0.56
LINC00562-201ENST00000566385 ZNF189O75820 626 aaPredicted RBP11.52□□□□□ -0.56
LINC00562-201ENST00000566385 ANXA9O76027 345 aa11.52□□□□□ -0.56
LINC00562-201ENST00000566385 C1RP00736 705 aa11.52□□□□□ -0.56
LINC00562-201ENST00000566385 POLBP06746 335 aa11.52□□□□□ -0.56
LINC00562-201ENST00000566385 MZF1P28698 734 aaPredicted RBP11.52□□□□□ -0.56
LINC00562-201ENST00000566385 RGRP47804 291 aa11.52□□□□□ -0.56
LINC00562-201ENST00000566385 WNT3AP56704 352 aa11.52□□□□□ -0.56
LINC00562-201ENST00000566385 WDR4P57081 412 aaKnown RBP11.52□□□□□ -0.56
LINC00562-201ENST00000566385 SF3A3Q12874 501 aaKnown RBP eCLIP11.52□□□□□ -0.56
LINC00562-201ENST00000566385 PPM1LQ5SGD2 360 aa11.52□□□□□ -0.56
LINC00562-201ENST00000566385 MROH9Q5TGP6 573 aa11.52□□□□□ -0.56
LINC00562-201ENST00000566385 KDELC1Q6UW63 502 aa11.52□□□□□ -0.56
LINC00562-201ENST00000566385 RNF135Q8IUD6 432 aa11.52□□□□□ -0.56
LINC00562-201ENST00000566385 BBS7Q8IWZ6 715 aa11.52□□□□□ -0.56
LINC00562-201ENST00000566385 SLC25A41Q8N5S1 370 aa11.52□□□□□ -0.56
LINC00562-201ENST00000566385 EXOC2Q96KP1 924 aa11.52□□□□□ -0.56
LINC00562-201ENST00000566385 AGAP2Q99490 1192 aa11.52□□□□□ -0.56
LINC00562-201ENST00000566385 SLC25A51Q9H1U9 297 aa11.52□□□□□ -0.56
LINC00562-201ENST00000566385 EPN3Q9H201 632 aa11.52□□□□□ -0.56
LINC00562-201ENST00000566385 GRID1Q9ULK0 1009 aa11.52□□□□□ -0.56
LINC00562-201ENST00000566385 CLEC4EQ9ULY5 219 aa11.52□□□□□ -0.56
LINC00562-201ENST00000566385 ACTL7BQ9Y614 415 aa11.52□□□□□ -0.56
LINC00562-201ENST00000566385 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.52□□□□□ -0.57
LINC00562-201ENST00000566385 TRIM49D1C9J1S8 452 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 C5orf67F2Z3F1 127 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 CBX4O00257 560 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 MOSPD3O75425 235 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 MTA1Q13330 715 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 ZNF177Q13360 481 aaPredicted RBP11.52□□□□□ -0.57
LINC00562-201ENST00000566385 SLC1A5Q15758 541 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 QPCTQ16769 361 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 ANKRD20A4Q4UJ75 823 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 LINGO4Q6UY18 593 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 SH2D5Q6ZV89 423 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 CARNMT1Q8N4J0 409 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 SHKBP1Q8TBC3 707 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 TTC17Q96AE7 1141 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 SMC6Q96SB8 1091 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 FSD1LQ9BXM9 530 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 MAGEH1Q9H213 219 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 PPCSQ9HAB8 311 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 ASAH2Q9NR71 780 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 CFAP97Q9P2B7 532 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 TBC1D30Q9Y2I9 924 aa11.52□□□□□ -0.57
LINC00562-201ENST00000566385 GFRA2O00451 464 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 SNAP91O60641 907 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 CD160O95971 181 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 TOP3BO95985 862 aaKnown RBP11.51□□□□□ -0.57
LINC00562-201ENST00000566385 RHOCP08134 193 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 GSTA2P09210 222 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 GEMP55040 296 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 DMTNQ08495 405 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 RNF219Q5W0B1 726 aaPredicted RBP11.51□□□□□ -0.57
LINC00562-201ENST00000566385 TPGS1Q6ZTW0 290 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 ADGRD2Q7Z7M1 963 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 TAX1BP1Q86VP1 789 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 DENND1AQ8TEH3 1009 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 FATE1Q969F0 183 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 CERS2Q96G23 380 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 CCT8L2Q96SF2 557 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 SEMA3CQ99985 751 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 IL22Q9GZX6 179 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 ATP13A1Q9HD20 1204 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 SLC2A6Q9UGQ3 507 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 YBX2Q9Y2T7 364 aaKnown RBP11.51□□□□□ -0.57
LINC00562-201ENST00000566385 FAM47DPA6NHR8 397 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 H0Y626 953 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 PYGBP11216 843 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 CA4P22748 312 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 GMPRP36959 345 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 ABCG1P45844 678 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 NPY2RP49146 381 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 NR1H3Q13133 447 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 HSP90AA5PQ58FG0 334 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 CDHR3Q6ZTQ4 885 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 CYS1Q717R9 158 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 LINC00523Q86TU6 105 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 ELMOD1Q8N336 334 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 PNPLA1Q8N8W4 532 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 CENPTQ96BT3 561 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 TMA16Q96EY4 203 aaKnown RBP11.51□□□□□ -0.57
LINC00562-201ENST00000566385 ZNF317Q96PQ6 595 aaPredicted RBP11.51□□□□□ -0.57
LINC00562-201ENST00000566385 PAIP2Q9BPZ3 127 aaKnown RBP11.51□□□□□ -0.57
LINC00562-201ENST00000566385 MUC3BQ9H195 1237 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 FAM169AQ9Y6X4 670 aa11.51□□□□□ -0.57
LINC00562-201ENST00000566385 IQANK1A0A1B0GTG1 560 aa11.5□□□□□ -0.57
LINC00562-201ENST00000566385 ILVBLA1L0T0 632 aa11.5□□□□□ -0.57
LINC00562-201ENST00000566385 GMNCA6NCL1 334 aa11.5□□□□□ -0.57
LINC00562-201ENST00000566385 CLASP2O75122 1294 aaKnown RBP11.5□□□□□ -0.57
LINC00562-201ENST00000566385 RFPL1O75677 317 aa11.5□□□□□ -0.57
LINC00562-201ENST00000566385 USP1O94782 785 aa11.5□□□□□ -0.57
LINC00562-201ENST00000566385 PRKCGP05129 697 aa11.5□□□□□ -0.57
LINC00562-201ENST00000566385 RHOP08100 348 aa11.5□□□□□ -0.57
LINC00562-201ENST00000566385 SLC7A9P82251 487 aa11.5□□□□□ -0.57
LINC00562-201ENST00000566385 ARF5P84085 180 aa11.5□□□□□ -0.57
LINC00562-201ENST00000566385 CBX2Q14781 532 aaPredicted RBP11.5□□□□□ -0.57
LINC00562-201ENST00000566385 TEAD2Q15562 447 aa11.5□□□□□ -0.57
LINC00562-201ENST00000566385 ZSCAN26Q16670 478 aa11.5□□□□□ -0.57
LINC00562-201ENST00000566385 GPR158Q5T848 1215 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms