RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, human

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HACD3-208	ENST00000566239	ARTN	Q5T4W7	220 aa		13.6	□□□□□ -0.23
HACD3-208	ENST00000566239	KIAA1161	Q6NSJ0	714 aa		13.6	□□□□□ -0.23
HACD3-208	ENST00000566239	KANSL1	Q7Z3B3	1105 aa		13.6	□□□□□ -0.23
HACD3-208	ENST00000566239	PHLDB2	Q86SQ0	1253 aa		13.6	□□□□□ -0.23
HACD3-208	ENST00000566239	ZSCAN30	Q86W11	494 aa		13.6	□□□□□ -0.23
HACD3-208	ENST00000566239	MARCH9	Q86YJ5	346 aa		13.6	□□□□□ -0.23
HACD3-208	ENST00000566239	ISG20	Q96AZ6	181 aa	Known RBP	13.6	□□□□□ -0.23
HACD3-208	ENST00000566239	NXPE2	Q96DL1	559 aa		13.6	□□□□□ -0.23
HACD3-208	ENST00000566239	FEM1C	Q96JP0	617 aa		13.6	□□□□□ -0.23
HACD3-208	ENST00000566239	SELENOO	Q9BVL4	669 aa		13.6	□□□□□ -0.23
HACD3-208	ENST00000566239	MAGEH1	Q9H213	219 aa		13.6	□□□□□ -0.23
HACD3-208	ENST00000566239	ZDHHC6	Q9H6R6	413 aa		13.6	□□□□□ -0.23
HACD3-208	ENST00000566239	KLHL11	Q9NVR0	708 aa		13.6	□□□□□ -0.23
HACD3-208	ENST00000566239	ADAM22	Q9P0K1	906 aa		13.6	□□□□□ -0.23
HACD3-208	ENST00000566239	DNAI1	Q9UI46	699 aa		13.6	□□□□□ -0.23
HACD3-208	ENST00000566239	RAX	Q9Y2V3	346 aa		13.6	□□□□□ -0.23
HACD3-208	ENST00000566239	FCF1	Q9Y324	198 aa	Known RBP	13.6	□□□□□ -0.23
HACD3-208	ENST00000566239	SPEG	Q15772	3267 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	ACACA	Q13085	2346 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	DSP	P15924	2871 aa	Known RBP	13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	ANKRD62	A6NC57	917 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239		A6NNZ2	444 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	EPHB6	O15197	1021 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	ZNF821	O75541	412 aa	Predicted RBP	13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	UNG	P13051	313 aa	Predicted RBP	13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	GPD1	P21695	349 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	ACVRL1	P37023	503 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	COPB1	P53618	953 aa	Known RBP	13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	GSC	P56915	257 aa	Predicted RBP	13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	MYL5	Q02045	173 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	TMEM259	Q4ZIN3	620 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	HES3	Q5TGS1	186 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	MANEAL	Q5VSG8	457 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	SEL1L3	Q68CR1	1132 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	C19orf48	Q6RUI8	117 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	RBM43	Q6ZSC3	357 aa	Known RBP	13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	DCP2	Q8IU60	420 aa	Known RBP	13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	PLPP6	Q8IY26	295 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	RYBP	Q8N488	228 aa	Predicted RBP	13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	OR13H1	Q8NG92	308 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	JOSD2	Q8TAC2	188 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	GPT2	Q8TD30	523 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	FAM172A	Q8WUF8	416 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	CENPI	Q92674	756 aa	Predicted RBP	13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	TBC1D31	Q96DN5	1066 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	LRIG1	Q96JA1	1093 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	SLC17A9	Q9BYT1	436 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	TM6SF2	Q9BZW4	377 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	FZD3	Q9NPG1	666 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	SCUBE2	Q9NQ36	999 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	SEPT11	Q9NVA2	429 aa	Known RBP	13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	ANO10	Q9NW15	660 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	TMEM248	Q9NWD8	314 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	HECA	Q9UBI9	543 aa	Predicted RBP	13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	LIMA1	Q9UHB6	759 aa	Known RBP	13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	ZFR2	Q9UPR6	939 aa	Known RBP	13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	SIK3	Q9Y2K2	1263 aa		13.59	□□□□□ -0.23
HACD3-208	ENST00000566239	NEMP2	A6NFY4	417 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	GOLGA6L22	H0YM25	854 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	RNF103	O00237	685 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	AP1G1	O43747	822 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	RAMP2	O60895	175 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	LRIG2	O94898	1065 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	PLEK	P08567	350 aa	Predicted RBP	13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	ALPPL2	P10696	532 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	DES	P17661	470 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	CDK11B	P21127	795 aa	Known RBP	13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	DGKA	P23743	735 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	ACP1	P24666	158 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	RFC1	P35251	1148 aa	Predicted RBP	13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	SNRPD1	P62314	119 aa	Known RBP	13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	DAB2	P98082	770 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	UBXN1	Q04323	297 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	ZNF211	Q13398	564 aa	Predicted RBP	13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	STX1A	Q16623	288 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	CLEC16A	Q2KHT3	1053 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	COL28A1	Q2UY09	1125 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	RAB6C	Q53S08	254 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	GCNT7	Q6ZNI0	430 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	PARS2	Q7L3T8	475 aa	Known RBP	13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	ABI3BP	Q7Z7G0	1075 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	SLFN11	Q7Z7L1	901 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	NLRP14	Q86W24	1093 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	ZNF354C	Q86Y25	554 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	PHF13	Q86YI8	300 aa	Predicted RBP	13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	CCDC185	Q8N715	623 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	C3orf20	Q8ND61	904 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	OR2AP1	Q8NGE2	309 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	OR4C6	Q8NH72	309 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	ARHGEF2	Q92974	986 aa	Known RBP	13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	NTAN1	Q96AB6	310 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	RAB7B	Q96AH8	199 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	ARHGEF26	Q96DR7	871 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	IFT43	Q96FT9	208 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	RAB6C	Q9H0N0	254 aa		13.58	□□□□□ -0.24
HACD3-208	ENST00000566239	NDFIP2	Q9NV92	336 aa		13.58	□□□□□ -0.24

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