RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 GOLGA8SH3BPF8 625 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 RAD51BO15315 384 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 AP1G1O43747 822 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 PIAS2O75928 621 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 PCDH8O95206 1070 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 PAK4O96013 591 aaPredicted RBP8.75□□□□□ -1.01
CAPN3-213ENST00000565173 CKMT1AP12532 417 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 MYF5P13349 255 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 ADRB3P13945 408 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 CHRNB2P17787 502 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 ITGB7P26010 798 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 L1CAMP32004 1257 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 ADRA1BP35368 520 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 ACVRL1P37023 503 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 E2F1Q01094 437 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 NRG1Q02297 640 aaPredicted RBP8.75□□□□□ -1.01
CAPN3-213ENST00000565173 GNA12Q03113 381 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 CCDC14Q49A88 953 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 CARD16Q5EG05 197 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 TCP11X2Q5H9J9 407 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 FAM72AQ5TYM5 149 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 CDCP2Q5VXM1 449 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 FAM72DQ6L9T8 149 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 NLRP14Q86W24 1093 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 FAM72BQ86X60 149 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 FAM114A1Q8IWE2 563 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 PLPP6Q8IY26 295 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 PCDH20Q8N6Y1 951 aaKnown RBP8.75□□□□□ -1.01
CAPN3-213ENST00000565173 EMC1Q8N766 993 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 FAM181AQ8N9Y4 354 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 SNIP1Q8TAD8 396 aaKnown RBP8.75□□□□□ -1.01
CAPN3-213ENST00000565173 SLC20A1Q8WUM9 679 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 HEPHQ9BQS7 1158 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 OSBPL2Q9H1P3 480 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 PDCL3Q9H2J4 239 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 PRORYQ9H606 182 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 ATP13A1Q9HD20 1204 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 DYRK4Q9NR20 520 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 KLF15Q9UIH9 416 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 NOCTQ9UK39 431 aaKnown RBP8.75□□□□□ -1.01
CAPN3-213ENST00000565173 NEU3Q9UQ49 428 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 RAI2Q9Y5P3 530 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 AK5Q9Y6K8 562 aa8.75□□□□□ -1.01
CAPN3-213ENST00000565173 SCAMP1O15126 338 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 SPINT1O43278 529 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 OPA1O60313 960 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 BRINP1O60477 761 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 MT-CO3P00414 261 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 CYP1A1P04798 512 aaPredicted RBP8.74□□□□□ -1.01
CAPN3-213ENST00000565173 MMP8P22894 467 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 GKP32189 559 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 ABCG1P45844 678 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 RECQLP46063 649 aaPredicted RBP8.74□□□□□ -1.01
CAPN3-213ENST00000565173 KLK7P49862 253 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 CCNHP51946 323 aaPredicted RBP8.74□□□□□ -1.01
CAPN3-213ENST00000565173 NEK3P51956 506 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 RPS21P63220 83 aaKnown RBP8.74□□□□□ -1.01
CAPN3-213ENST00000565173 ATP11AP98196 1134 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 FMO1Q01740 532 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 PTP4A2Q12974 167 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 FZD2Q14332 565 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 C15orf59Q2T9L4 293 aaPredicted RBP8.74□□□□□ -1.01
CAPN3-213ENST00000565173 ZNF542PQ5EBM4 170 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 TPRG1LQ5T0D9 272 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 NAA35Q5VZE5 725 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 KIAA1161Q6NSJ0 714 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 RETSATQ6NUM9 610 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 PARS2Q7L3T8 475 aaKnown RBP8.74□□□□□ -1.01
CAPN3-213ENST00000565173 TMC6Q7Z403 805 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 DRC7Q8IY82 874 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 JOSD2Q8TAC2 188 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 FAM174AQ8TBP5 190 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 RXFP2Q8WXD0 754 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 CENPIQ92674 756 aaPredicted RBP8.74□□□□□ -1.01
CAPN3-213ENST00000565173 FGF11Q92914 225 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 ISG20Q96AZ6 181 aaKnown RBP8.74□□□□□ -1.01
CAPN3-213ENST00000565173 PPP1R16AQ96I34 528 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 FEM1CQ96JP0 617 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 APOLD1Q96LR9 279 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 LENG8Q96PV6 779 aaPredicted RBP8.74□□□□□ -1.01
CAPN3-213ENST00000565173 KLF6Q99612 283 aaPredicted RBP8.74□□□□□ -1.01
CAPN3-213ENST00000565173 C1QTNF2Q9BXJ5 285 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 CALN1Q9BXU9 219 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 GANQ9H2C0 597 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 RETREG1Q9H6L5 497 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 METTL5Q9NRN9 209 aaKnown RBP8.74□□□□□ -1.01
CAPN3-213ENST00000565173 NLGN3Q9NZ94 848 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 HECAQ9UBI9 543 aaPredicted RBP8.74□□□□□ -1.01
CAPN3-213ENST00000565173 OR12D3Q9UGF7 316 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 FCF1Q9Y324 198 aaKnown RBP8.74□□□□□ -1.01
CAPN3-213ENST00000565173 PCDHB1Q9Y5F3 818 aa8.74□□□□□ -1.01
CAPN3-213ENST00000565173 CHD5Q8TDI0 1954 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 HELZ2Q9BYK8 2649 aaKnown RBP8.73□□□□□ -1.01
CAPN3-213ENST00000565173 SPTY2D1-AS1A0A0U1RR47 76 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 IGLON5A6NGN9 336 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 C2CD4BA6NLJ0 364 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 A6NNZ2 444 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 K7ESM1 405 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 EPHB6O15197 1021 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 FFAR2O15552 330 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms