RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 MCCD1P59942 119 aaPredicted RBP16.51■□□□□ 0.23
LINC00554-201ENST00000564841 CA9Q16790 459 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 RP9Q8TA86 221 aaKnown RBP16.51■□□□□ 0.23
LINC00554-201ENST00000564841 MTG1Q9BT17 334 aaPredicted RBP16.51■□□□□ 0.23
LINC00554-201ENST00000564841 GBA3Q9H227 469 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 DCDC2Q9UHG0 476 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 ZDHHC2Q9UIJ5 367 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 DAPK2Q9UIK4 370 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 CDH7Q9ULB5 785 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 PTPRFP10586 1907 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.51■□□□□ 0.23
LINC00554-201ENST00000564841 DLGAP1O14490 977 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 AKAP10O43572 662 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 KDM1AO60341 852 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 SAT1P21673 171 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 ADCYAP1R1P41586 468 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 SERPINB9P50453 376 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 NKX2-5P52952 324 aaPredicted RBP16.51■□□□□ 0.23
LINC00554-201ENST00000564841 PLCL1Q15111 1095 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 TRNP1Q6NT89 227 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 MAMDC4Q6UXC1 1216 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 TIFABQ6ZNK6 161 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 ARMCX2Q7L311 632 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 DPP9Q86TI2 863 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 CYGBQ8WWM9 190 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 TFAP2CQ92754 450 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 ANKRD60Q9BZ19 345 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 CNOT6Q9ULM6 557 aaKnown RBP16.51■□□□□ 0.23
LINC00554-201ENST00000564841 KCNH4Q9UQ05 1017 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 ERGIC3Q9Y282 383 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 DGKBQ9Y6T7 804 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 PRORSD1PA6NEY8 169 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 PGS1Q32NB8 556 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 CELF3Q5SZQ8 465 aaKnown RBP16.51■□□□□ 0.23
LINC00554-201ENST00000564841 RWDD4Q6NW29 188 aaKnown RBP16.51■□□□□ 0.23
LINC00554-201ENST00000564841 KCTD8Q6ZWB6 473 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 TWNKQ96RR1 684 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 GID8Q9NWU2 228 aa16.51■□□□□ 0.23
LINC00554-201ENST00000564841 EVPLQ92817 2033 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 G3V2L1 256 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 ATG7O95352 703 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 NCAM1P13591 858 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 IL4RP24394 825 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 EDNRBP24530 442 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 HOXD11P31277 338 aaPredicted RBP16.5■□□□□ 0.23
LINC00554-201ENST00000564841 GLRBP48167 497 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 LAMTOR4Q0VGL1 99 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 DNASE1L3Q13609 305 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 SEPT6Q14141 434 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 PIWIL3Q7Z3Z3 882 aaKnown RBP16.5■□□□□ 0.23
LINC00554-201ENST00000564841 HM13Q8TCT9 377 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 CANT1Q8WVQ1 401 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 DLG3Q92796 817 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 CGRRF1Q99675 332 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 KLHL25Q9H0H3 589 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 RSAD1Q9HA92 442 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 PRDM16Q9HAZ2 1276 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 RRAGCQ9HB90 399 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 SNX15Q9NRS6 342 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 CNTN6Q9UQ52 1028 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 PAPPA2Q9BXP8 1791 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 LCTP09848 1927 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 DICER1Q9UPY3 1922 aaKnown RBP16.5■□□□□ 0.23
LINC00554-201ENST00000564841 CELF2O95319 508 aaKnown RBP16.5■□□□□ 0.23
LINC00554-201ENST00000564841 MGAT1P26572 445 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 RGS7P49802 495 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 BCAR1P56945 870 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 PSME3P61289 254 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 DEPDC1Q5TB30 811 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 EFCAB12Q6NXP0 572 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 CYP4V2Q6ZWL3 525 aaPredicted RBP16.5■□□□□ 0.23
LINC00554-201ENST00000564841 PIGZQ86VD9 579 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 GPRC5AQ8NFJ5 357 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 BPIFB6Q8NFQ5 453 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 DRC3Q9H069 523 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 EFCAB1Q9HAE3 211 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 AP4E1Q9UPM8 1137 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 MFHAS1Q9Y4C4 1052 aa16.5■□□□□ 0.23
LINC00554-201ENST00000564841 COPG1Q9Y678 874 aaKnown RBP16.5■□□□□ 0.23
LINC00554-201ENST00000564841 TK2O00142 265 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 GPR25O00155 361 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 DYNC1LI2O43237 492 aaPredicted RBP16.49■□□□□ 0.23
LINC00554-201ENST00000564841 GRID2O43424 1007 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 PIGNO95427 931 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 MAP4P27816 1152 aaKnown RBP16.49■□□□□ 0.23
LINC00554-201ENST00000564841 IDUAP35475 653 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 ARL2P36404 184 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 NAMPTP43490 491 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 GBE1Q04446 702 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 NFATC3Q12968 1075 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 TRIM25Q14258 630 aaKnown RBP16.49■□□□□ 0.23
LINC00554-201ENST00000564841 MOGQ16653 247 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 ZNF699Q32M78 642 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 SMUG1Q53HV7 270 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 PRAMEF19Q5SWL8 479 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 DCLK2Q8N568 766 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 AFG1LQ8WV93 481 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 RNF157Q96PX1 679 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 EIF2AQ9BY44 585 aaKnown RBP16.49■□□□□ 0.23
LINC00554-201ENST00000564841 GIN1Q9NXP7 522 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms