RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 HDAC3O15379 428 aa15.47■□□□□ 0.07
HERC2-207ENST00000564734 PHGDHO43175 533 aaKnown RBP15.47■□□□□ 0.07
HERC2-207ENST00000564734 MAFKO60675 156 aa15.47■□□□□ 0.07
HERC2-207ENST00000564734 BDNFP23560 247 aa15.47■□□□□ 0.07
HERC2-207ENST00000564734 POLD2P49005 469 aa15.47■□□□□ 0.07
HERC2-207ENST00000564734 NSUN2Q08J23 767 aaKnown RBP eCLIP15.47■□□□□ 0.07
HERC2-207ENST00000564734 SLC12A1Q13621 1099 aa15.47■□□□□ 0.07
HERC2-207ENST00000564734 USP10Q14694 798 aaKnown RBP15.47■□□□□ 0.07
HERC2-207ENST00000564734 ARL13AQ5H913 290 aaPredicted RBP15.47■□□□□ 0.07
HERC2-207ENST00000564734 KCTD4Q8WVF5 259 aa15.47■□□□□ 0.07
HERC2-207ENST00000564734 YIPF3Q9GZM5 350 aa15.47■□□□□ 0.07
HERC2-207ENST00000564734 WDR55Q9H6Y2 383 aaPredicted RBP15.47■□□□□ 0.07
HERC2-207ENST00000564734 GLOD4Q9HC38 313 aa15.47■□□□□ 0.07
HERC2-207ENST00000564734 ACSS2Q9NR19 701 aa15.47■□□□□ 0.07
HERC2-207ENST00000564734 RUVBL2Q9Y230 463 aaKnown RBP15.47■□□□□ 0.07
HERC2-207ENST00000564734 SSX2IPQ9Y2D8 614 aa15.47■□□□□ 0.07
HERC2-207ENST00000564734 CCDC78A2IDD5 438 aa15.47■□□□□ 0.07
HERC2-207ENST00000564734 MT-CYBP00156 380 aaPredicted RBP15.47■□□□□ 0.07
HERC2-207ENST00000564734 CYP11A1P05108 521 aa15.47■□□□□ 0.07
HERC2-207ENST00000564734 PIK3R1P27986 724 aa15.47■□□□□ 0.07
HERC2-207ENST00000564734 SREBF2Q12772 1141 aa15.47■□□□□ 0.07
HERC2-207ENST00000564734 NOGQ13253 232 aa15.47■□□□□ 0.07
HERC2-207ENST00000564734 LSM12Q3MHD2 195 aaKnown RBP15.47■□□□□ 0.07
HERC2-207ENST00000564734 KBTBD6Q86V97 674 aa15.47■□□□□ 0.07
HERC2-207ENST00000564734 SLC41A1Q8IVJ1 513 aa15.47■□□□□ 0.07
HERC2-207ENST00000564734 FSTL5Q8N475 847 aaPredicted RBP15.47■□□□□ 0.07
HERC2-207ENST00000564734 EFCAB3Q8N7B9 438 aa15.47■□□□□ 0.07
HERC2-207ENST00000564734 ZDHHC2Q9UIJ5 367 aa15.47■□□□□ 0.07
HERC2-207ENST00000564734 PGK1P00558 417 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 CHRNA1P02708 482 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 TFEBP19484 476 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 VEGFBP49765 207 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 IFNL1Q8IU54 200 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 AGR3Q8TD06 166 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 SLC26A7Q8TE54 656 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 HAPLN3Q96S86 360 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 SENP6Q9GZR1 1112 aaPredicted RBP15.46■□□□□ 0.07
HERC2-207ENST00000564734 MYADML2A6NDP7 307 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 DFFAO00273 331 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 IRAK2O43187 625 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 DDHD2O94830 711 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 PIGNO95427 931 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 LYNP07948 512 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 SRGAP2BP0DMP2 458 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 DLG1Q12959 904 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 CRHR2Q13324 411 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 TSTD2Q5T7W7 516 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 FOXB2Q5VYV0 432 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 LRRC8EQ6NSJ5 796 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 LRRTM3Q86VH5 581 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 CEP97Q8IW35 865 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 DENND6AQ8IWF6 608 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 SLC39A8Q9C0K1 460 aa15.46■□□□□ 0.07
HERC2-207ENST00000564734 MRM3Q9HC36 420 aaKnown RBP15.46■□□□□ 0.07
HERC2-207ENST00000564734 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.46■□□□□ 0.07
HERC2-207ENST00000564734 GOLGA8QA0A0J9YX86 632 aa15.46■□□□□ 0.06
HERC2-207ENST00000564734 GOLGA8OA6NCC3 632 aa15.46■□□□□ 0.06
HERC2-207ENST00000564734 FAM155AB1AL88 458 aaPredicted RBP15.46■□□□□ 0.06
HERC2-207ENST00000564734 GOLGA8NF8WBI6 632 aa15.46■□□□□ 0.06
HERC2-207ENST00000564734 CASQ2O14958 399 aaPredicted RBP15.46■□□□□ 0.06
HERC2-207ENST00000564734 MATN3O15232 486 aa15.46■□□□□ 0.06
HERC2-207ENST00000564734 SLC22A2O15244 555 aa15.46■□□□□ 0.06
HERC2-207ENST00000564734 DLX3O60479 287 aa15.46■□□□□ 0.06
HERC2-207ENST00000564734 THRAP10827 490 aa15.46■□□□□ 0.06
HERC2-207ENST00000564734 ODC1P11926 461 aa15.46■□□□□ 0.06
HERC2-207ENST00000564734 AVPR1AP37288 418 aa15.46■□□□□ 0.06
HERC2-207ENST00000564734 MPP1Q00013 466 aa15.46■□□□□ 0.06
HERC2-207ENST00000564734 ASPHQ12797 758 aa15.46■□□□□ 0.06
HERC2-207ENST00000564734 PRKAA1Q13131 559 aa15.46■□□□□ 0.06
HERC2-207ENST00000564734 MSLNQ13421 630 aaPredicted RBP15.46■□□□□ 0.06
HERC2-207ENST00000564734 AFMIDQ63HM1 303 aa15.46■□□□□ 0.06
HERC2-207ENST00000564734 SEL1L3Q68CR1 1132 aa15.46■□□□□ 0.06
HERC2-207ENST00000564734 RWDD4Q6NW29 188 aaKnown RBP15.46■□□□□ 0.06
HERC2-207ENST00000564734 ESRP1Q6NXG1 681 aaKnown RBP15.46■□□□□ 0.06
HERC2-207ENST00000564734 RNF34Q969K3 372 aa15.46■□□□□ 0.06
HERC2-207ENST00000564734 PPP2R3CQ969Q6 453 aa15.46■□□□□ 0.06
HERC2-207ENST00000564734 DMAP1Q9NPF5 467 aaPredicted RBP15.46■□□□□ 0.06
HERC2-207ENST00000564734 CCDC189A1A4V9 331 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 RGSL1A5PLK6 1076 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 ANXA9O76027 345 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 SFT2D3Q587I9 215 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 TCHHL1Q5QJ38 904 aaPredicted RBP15.45■□□□□ 0.06
HERC2-207ENST00000564734 RNF220Q5VTB9 566 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 TMC7Q7Z402 723 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 CCDC124Q96CT7 223 aaKnown RBP15.45■□□□□ 0.06
HERC2-207ENST00000564734 TMEM209Q96SK2 561 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 EBF3Q9H4W6 596 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 TREX1Q9NSU2 369 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 VTI1BQ9UEU0 232 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 TCAF1Q9Y4C2 921 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 SHROOM3Q8TF72 1996 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 SERPINB5P36952 375 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 NAGLUP54802 743 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 RAB10P61026 200 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 MGAT3Q09327 533 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 POU6F1Q14863 301 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 UGP2Q16851 508 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 BRMS1LQ5PSV4 323 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 LPCAT4Q643R3 524 aa15.45■□□□□ 0.06
HERC2-207ENST00000564734 ATPAF2Q8N5M1 289 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms