RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 SLITRK1Q96PX8 696 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 KATNAL1Q9BW62 490 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 CADM1Q9BY67 442 aaKnown RBP4.59□□□□□ -1.67
CHD9-212ENST00000564641 BRD8Q9H0E9 1235 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 ZNF700Q9H0M5 742 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 SLC22A11Q9NSA0 550 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 NDUFAF4Q9P032 175 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 HERC5Q9UII4 1024 aaKnown RBP4.59□□□□□ -1.67
CHD9-212ENST00000564641 C19orf53Q9UNZ5 99 aaPredicted RBP4.59□□□□□ -1.67
CHD9-212ENST00000564641 OSGIN2Q9Y236 505 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 KIF14Q15058 1648 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 EYA2O00167 538 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 GRM8O00222 908 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 LINC01565O15544 149 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 TPD52L2O43399 206 aaKnown RBP4.58□□□□□ -1.68
CHD9-212ENST00000564641 LDB2O43679 373 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 KCNJ13O60928 360 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 EIF3JO75822 258 aaKnown RBP4.58□□□□□ -1.68
CHD9-212ENST00000564641 KRT36O76013 467 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 ZBTB11O95625 1053 aaPredicted RBP4.58□□□□□ -1.68
CHD9-212ENST00000564641 TYK2P29597 1187 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 HNF4GQ14541 408 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 GXYLT1Q4G148 440 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 TMEM268Q5VZI3 342 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 WBP2NLQ6ICG8 309 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 MTFR2Q6P444 385 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 ARMC9Q7Z3E5 817 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 CEP76Q8TAP6 659 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 PSMD1Q99460 953 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 POLR3GLQ9BT43 218 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 C1QTNF4Q9BXJ3 329 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 HDHD5Q9BXW7 423 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 MYH16Q9H6N6 1097 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 DDX31Q9H8H2 851 aaKnown RBP4.58□□□□□ -1.68
CHD9-212ENST00000564641 NLRC4Q9NPP4 1024 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 PLEKHB1Q9UF11 243 aaPredicted RBP4.58□□□□□ -1.68
CHD9-212ENST00000564641 LZTS1Q9Y250 596 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 RICTORQ6R327 1708 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 MYO5CQ9NQX4 1742 aa4.58□□□□□ -1.68
CHD9-212ENST00000564641 MADDQ8WXG6 1647 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 CCDC18Q5T9S5 1454 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 PLCH2O75038 1416 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 C9orf84Q5VXU9 1444 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 CLSPNQ9HAW4 1339 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 LOC102724159A0A0B4J2E5 919 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 PLSCR5A0PG75 271 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 AQP12BA6NM10 295 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 HSPB6O14558 160 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 PLIN1O60240 522 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 HEXIM1O94992 359 aaKnown RBP4.57□□□□□ -1.68
CHD9-212ENST00000564641 FCGR2AP12318 317 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 PPM1AP35813 382 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 TMPRSS3P57727 454 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 POU5F1BQ06416 359 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 PKP1Q13835 747 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 UBE4AQ14139 1066 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 PWP2Q15269 919 aaKnown RBP4.57□□□□□ -1.68
CHD9-212ENST00000564641 RPS6KA2Q15349 733 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 PGBD2Q6P3X8 592 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 MON1BQ7L1V2 547 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 GALNT7Q86SF2 657 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 TMC8Q8IU68 726 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 TEX45Q8NA69 505 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 ZNF527Q8NB42 609 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 MORC4Q8TE76 937 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 STYXQ8WUJ0 223 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 TEFMQ96QE5 360 aaKnown RBP4.57□□□□□ -1.68
CHD9-212ENST00000564641 DAPP1Q9UN19 280 aa4.57□□□□□ -1.68
CHD9-212ENST00000564641 RIMS1Q86UR5 1692 aaKnown RBP4.57□□□□□ -1.68
CHD9-212ENST00000564641 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.56□□□□□ -1.68
CHD9-212ENST00000564641 ATP10AO60312 1499 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 UHRF1BP1Q6BDS2 1440 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 SCAPERQ9BY12 1400 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 CNTLNQ9NXG0 1405 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 IGHV4-28A0A0C4DH34 117 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 SRRM3A6NNA2 597 aaPredicted RBP4.56□□□□□ -1.68
CHD9-212ENST00000564641 RPS6KA3P51812 740 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 AP2B1P63010 937 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 TUBA1BP68363 451 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 SLC39A14Q15043 492 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 ZNF284Q2VY69 593 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 TTC22Q5TAA0 569 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 IL31Q6EBC2 164 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 DGAT2L7PQ6IED9 249 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 KIAA1324Q6UXG2 1013 aaKnown RBP4.56□□□□□ -1.68
CHD9-212ENST00000564641 PATL1Q86TB9 770 aaKnown RBP4.56□□□□□ -1.68
CHD9-212ENST00000564641 SERPINA11Q86U17 422 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 WDR5BQ86VZ2 330 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 CERS3Q8IU89 383 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 SLC44A2Q8IWA5 706 aaPredicted RBP4.56□□□□□ -1.68
CHD9-212ENST00000564641 VPS52Q8N1B4 723 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 PTGR2Q8N8N7 351 aaPredicted RBP4.56□□□□□ -1.68
CHD9-212ENST00000564641 WFIKKN2Q8TEU8 576 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 ARRDC3Q96B67 414 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 IGSF21Q96ID5 467 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 FIZ1Q96SL8 496 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 ELAC1Q9H777 363 aaKnown RBP4.56□□□□□ -1.68
CHD9-212ENST00000564641 ARNT2Q9HBZ2 717 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 PRDM8Q9NQV8 689 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 FNIP2Q9P278 1114 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms