RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ASIC3Q9UHC3 531 aa13.14□□□□□ -0.31
SPG7-209ENST00000564047 UTP11Q9Y3A2 253 aaKnown RBP13.14□□□□□ -0.31
SPG7-209ENST00000564047 MYO10Q9HD67 2058 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.13□□□□□ -0.31
SPG7-209ENST00000564047 BHMG1C9JSJ3 638 aaPredicted RBP13.13□□□□□ -0.31
SPG7-209ENST00000564047 MAP2K7O14733 419 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 TIMM44O43615 452 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 NEBLO76041 1014 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 SEC31AO94979 1220 aaKnown RBP13.13□□□□□ -0.31
SPG7-209ENST00000564047 HEXIM1O94992 359 aaKnown RBP13.13□□□□□ -0.31
SPG7-209ENST00000564047 CD160O95971 181 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 RHOXF2BP0C7M4 288 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 SRFP11831 508 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 ETS1P14921 441 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 GLULP15104 373 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 NBL1P41271 181 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 MMP13P45452 471 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 VASPP50552 380 aaPredicted RBP13.13□□□□□ -0.31
SPG7-209ENST00000564047 NRLP54845 237 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 DRG2P55039 364 aaKnown RBP13.13□□□□□ -0.31
SPG7-209ENST00000564047 ECT2LQ008S8 904 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 SLC7A5Q01650 507 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 TRIP13Q15645 432 aaPredicted RBP13.13□□□□□ -0.31
SPG7-209ENST00000564047 MAP9Q49MG5 647 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 BEND6Q5SZJ8 279 aaPredicted RBP13.13□□□□□ -0.31
SPG7-209ENST00000564047 TMEM215Q68D42 235 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 DUPD1Q68J44 220 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 ITPRIPL1Q6GPH6 555 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 LEKR1Q6ZMV7 388 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 ARHGEF18Q6ZSZ5 1173 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 NUDT18Q6ZVK8 323 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 HDXQ7Z353 690 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 PRUNE1Q86TP1 453 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 RALGPS2Q86X27 583 aaPredicted RBP13.13□□□□□ -0.31
SPG7-209ENST00000564047 CNTD1Q8N815 330 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 TERB1Q8NA31 727 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 CCDC110Q8TBZ0 833 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 USP33Q8TEY7 942 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 EXOC4Q96A65 974 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 MSANTD3Q96H12 275 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 PSKH2Q96QS6 385 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 RHOXF2Q9BQY4 288 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 FUT8Q9BYC5 575 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 SEPT3Q9UH03 358 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 DMGDHQ9UI17 866 aaKnown RBP13.13□□□□□ -0.31
SPG7-209ENST00000564047 SLC25A13Q9UJS0 675 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 HS3ST2Q9Y278 367 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 ATP8A1Q9Y2Q0 1164 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 EPG5Q9HCE0 2579 aa13.13□□□□□ -0.31
SPG7-209ENST00000564047 SPECC1L-ADORA2AF8WAN1 911 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 ZBTB24O43167 697 aaPredicted RBP13.12□□□□□ -0.31
SPG7-209ENST00000564047 KAT7O95251 611 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 ATP5BP06576 529 aaKnown RBP13.12□□□□□ -0.31
SPG7-209ENST00000564047 SRPRAP08240 638 aaKnown RBP13.12□□□□□ -0.31
SPG7-209ENST00000564047 CTHP32929 405 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 HSPA9P38646 679 aaKnown RBP13.12□□□□□ -0.31
SPG7-209ENST00000564047 ADCY8P40145 1251 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 GRIA2P42262 883 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 SOX9P48436 509 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 NUMBP49757 651 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 SERPINH1P50454 418 aaKnown RBP13.12□□□□□ -0.31
SPG7-209ENST00000564047 KDSRQ06136 332 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 GPS1Q13098 491 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 ZNF235Q14590 738 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 CYTH1Q15438 398 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 PARP6Q2NL67 630 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 LINGO4Q6UY18 593 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 SEC14L1Q92503 715 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 LRRC45Q96CN5 670 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 ZNF419Q96HQ0 510 aaPredicted RBP13.12□□□□□ -0.31
SPG7-209ENST00000564047 AGAP3Q96P47 875 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 P2RY13Q9BPV8 354 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 CINPQ9BW66 212 aaPredicted RBP13.12□□□□□ -0.31
SPG7-209ENST00000564047 CEP41Q9BYV8 373 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 GBA3Q9H227 469 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 ELOVL2Q9NXB9 296 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 ACTL7AQ9Y615 435 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 COL4A3Q01955 1670 aa13.12□□□□□ -0.31
SPG7-209ENST00000564047 EP300Q09472 2414 aaPredicted RBP13.11□□□□□ -0.31
SPG7-209ENST00000564047 TBC1D3BA6NDS4 549 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 PRRT4C9JH25 899 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 NDC80O14777 642 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 NARSO43776 548 aaKnown RBP13.11□□□□□ -0.31
SPG7-209ENST00000564047 SASH3O75995 380 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 TMCC1O94876 653 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 MT-CO1P00395 513 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 APODP05090 189 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 HLA-DQB2P05538 268 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 DLDP09622 509 aaKnown RBP13.11□□□□□ -0.31
SPG7-209ENST00000564047 IVDP26440 423 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 CD68P34810 354 aaPredicted RBP13.11□□□□□ -0.31
SPG7-209ENST00000564047 FDFT1P37268 417 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 CTSOP43234 321 aaPredicted RBP13.11□□□□□ -0.31
SPG7-209ENST00000564047 VPS41P49754 854 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 GALK1P51570 392 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 VSNL1P62760 191 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 GUCY2DQ02846 1103 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 MESP2Q0VG99 397 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 KCTD19Q17RG1 926 aaPredicted RBP13.11□□□□□ -0.31
SPG7-209ENST00000564047 NAIF1Q69YI7 327 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms