RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 THAP1Q9NVV9 213 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 OCIAD1Q9NX40 245 aa3.53□□□□□ -1.84
HMGB1P33-201ENST00000563485 HMX3A6NHT5 357 aa3.52□□□□□ -1.85
HMGB1P33-201ENST00000563485 EYA2O00167 538 aa3.52□□□□□ -1.85
HMGB1P33-201ENST00000563485 ITM2AO43736 263 aa3.52□□□□□ -1.85
HMGB1P33-201ENST00000563485 LDB3O75112 727 aa3.52□□□□□ -1.85
HMGB1P33-201ENST00000563485 CBX6O95503 412 aa3.52□□□□□ -1.85
HMGB1P33-201ENST00000563485 MMP3P08254 477 aa3.52□□□□□ -1.85
HMGB1P33-201ENST00000563485 CSF1P09603 554 aa3.52□□□□□ -1.85
HMGB1P33-201ENST00000563485 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P33-201ENST00000563485 RINLQ6ZS11 566 aa3.52□□□□□ -1.85
HMGB1P33-201ENST00000563485 FSIP1Q8NA03 581 aa3.52□□□□□ -1.85
HMGB1P33-201ENST00000563485 ZBTB8BQ8NAP8 495 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P33-201ENST00000563485 OTUD7AQ8TE49 926 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P33-201ENST00000563485 IL25Q9H293 177 aa3.52□□□□□ -1.85
HMGB1P33-201ENST00000563485 CXorf56Q9H5V9 222 aa3.52□□□□□ -1.85
HMGB1P33-201ENST00000563485 RETREG1Q9H6L5 497 aa3.52□□□□□ -1.85
HMGB1P33-201ENST00000563485 KCNG2Q9UJ96 466 aa3.52□□□□□ -1.85
HMGB1P33-201ENST00000563485 IGLV5-52A0A0A0MRZ9 124 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 DENND3A2RUS2 1198 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 CYSRT1A8MQ03 144 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 KDM4EB2RXH2 506 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 GRID2O43424 1007 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 STRNO43815 780 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 PLIN1O60240 522 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 KRT38O76015 456 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 CSTBP04080 98 aaKnown RBP3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 CKMT1AP12532 417 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 C21orf33P30042 268 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 SKIV2L2P42285 1042 aaKnown RBP3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 HTR3AP46098 478 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 MVDP53602 400 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 PRKAA2P54646 552 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 TUBA1BP68363 451 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 CTTNQ14247 550 aaKnown RBP3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 AP5B1Q2VPB7 878 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 RUNDC3AQ59EK9 446 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 GFI1BQ5VTD9 330 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 TANGO2Q6ICL3 276 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 CACNA2D3Q8IZS8 1091 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 GPT2Q8TD30 523 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 CSGALNACT1Q8TDX6 532 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 NR4A3Q92570 626 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 ATOH1Q92858 354 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 TXNDC15Q96J42 360 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 SLC25A33Q9BSK2 321 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 PCGF6Q9BYE7 350 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 NPFFR1Q9GZQ6 430 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 DDX31Q9H8H2 851 aaKnown RBP3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 GRHL1Q9NZI5 618 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 AGO1Q9UL18 857 aaKnown RBP3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 DHDHQ9UQ10 334 aa3.51□□□□□ -1.85
HMGB1P33-201ENST00000563485 E7EVH7 732 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 SLC16A5O15375 505 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 SERPINI2O75830 405 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 TFRCP02786 760 aaKnown RBP3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 PNPLA4P41247 253 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 PTPN9P43378 593 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 MTNR1AP48039 350 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 MXI1P50539 228 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 THOC5Q13769 683 aaKnown RBP3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 BLMHQ13867 455 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 BYSLQ13895 437 aaKnown RBP3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 IL13RA2Q14627 380 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 SLC39A14Q15043 492 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 SMAD1Q15797 465 aaKnown RBP3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 KIF19Q2TAC6 998 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 ZNF718Q3SXZ3 478 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 RETSATQ6NUM9 610 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 C1orf228Q6PIY5 440 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 RBFAQ8N0V3 343 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 TCP11L2Q8N4U5 519 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 OR6Y1Q8NGX8 325 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 LILRB1Q8NHL6 650 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 GOLGA1Q92805 767 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 KTI12Q96EK9 354 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 MSTO1Q9BUK6 570 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 TAF1DQ9H5J8 278 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 CLK4Q9HAZ1 481 aaKnown RBP3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 G6PC2Q9NQR9 355 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 TLR8Q9NR97 1041 aaKnown RBP3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 NLKQ9UBE8 527 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 GRHPRQ9UBQ7 328 aa3.5□□□□□ -1.85
HMGB1P33-201ENST00000563485 LOC102724159A0A0B4J2E5 919 aa3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 OR6C68A6NDL8 312 aa3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 METTL18O95568 372 aa3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 SNRNP70P08621 437 aaKnown RBP3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 YWHAQP27348 245 aa3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 DCTDP32321 178 aa3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 RBM5P52756 815 aaKnown RBP eCLIP3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 ARHGAP8P85298 464 aa3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 FOXO1Q12778 655 aa3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 PWP2Q15269 919 aaKnown RBP3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 TIGD6Q17RP2 521 aa3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 ZNF672Q499Z4 452 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 CCDC38Q502W7 563 aa3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 ZNF484Q5JVG2 852 aa3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 EFHC1Q5JVL4 640 aa3.49□□□□□ -1.85
HMGB1P33-201ENST00000563485 TMC8Q8IU68 726 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms