RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-206	ENST00000562791	TMED5	Q9Y3A6	229 aa		4.89	□□□□□ -1.63
CHD9-206	ENST00000562791	PCDHGB2	Q9Y5G2	931 aa		4.89	□□□□□ -1.63
CHD9-206	ENST00000562791	TMEM94	Q12767	1356 aa		4.89	□□□□□ -1.63
CHD9-206	ENST00000562791	KTN1	Q86UP2	1357 aa	Known RBP	4.89	□□□□□ -1.63
CHD9-206	ENST00000562791	RRBP1	Q9P2E9	1410 aa	Known RBP	4.89	□□□□□ -1.63
CHD9-206	ENST00000562791	EIF3CL	B5ME19	914 aa	Known RBP	4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	NKX2-8	O15522	239 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	TTI1	O43156	1089 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	TBCA	O75347	108 aa	Known RBP	4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	NTSR2	O95665	410 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	NGFR	P08138	427 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	RPSA	P08865	295 aa	Known RBP	4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	T-ENOL	P0DO92	83 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	KLRK1	P26718	216 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	CIITA	P33076	1130 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	TSPAN7	P41732	249 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	HSPA7	P48741	367 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	PGGT1B	P53609	377 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	FAM3B	P58499	235 aa	Predicted RBP	4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	ZBTB17	Q13105	803 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	AAK1	Q2M2I8	961 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	DGKK	Q5KSL6	1271 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	ANKRD40	Q6AI12	368 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	HMBOX1	Q6NT76	420 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	WDR93	Q6P2C0	686 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	KSR2	Q6VAB6	950 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	ATF7IP	Q6VMQ6	1270 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	NEK10	Q6ZWH5	1172 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	ARHGAP22	Q7Z5H3	698 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	TADA2B	Q86TJ2	420 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	DZIP1	Q86YF9	867 aa	Known RBP	4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	WDR63	Q8IWG1	891 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	ACMSD	Q8TDX5	336 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	TMEM174	Q8WUU8	243 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	ZFAND2B	Q8WV99	257 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	KIAA1191	Q96A73	305 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	MIB2	Q96AX9	1013 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	PPP1R14B	Q96C90	147 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	ERP27	Q96DN0	273 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	FAR2	Q96K12	515 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	CTAGE1	Q96RT6	745 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	XPO4	Q9C0E2	1151 aa	Known RBP	4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	RBM38	Q9H0Z9	239 aa	Known RBP	4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	MYLK2	Q9H1R3	596 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	MAP6D1	Q9H9H5	199 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	TCF7L2	Q9NQB0	619 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	NECTIN3	Q9NQS3	549 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	HELLS	Q9NRZ9	838 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	WWOX	Q9NZC7	414 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	FNIP2	Q9P278	1114 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	PROCR	Q9UNN8	238 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	SLC8A2	Q9UPR5	921 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	DHX57	Q6P158	1386 aa	Known RBP	4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	RPAP1	Q9BWH6	1393 aa	Predicted RBP	4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	MIA2	Q96PC5	1412 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	YEATS2	Q9ULM3	1422 aa		4.88	□□□□□ -1.63
CHD9-206	ENST00000562791	EME2	A4GXA9	379 aa	Predicted RBP	4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	DPPA5	A6NC42	116 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	CXorf65	A6NEN9	183 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	TMEM221	A6NGB7	291 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	C4orf47	A7E2U8	309 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	SPTLC2	O15270	562 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	SLC28A2	O43868	658 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	ATP6V1G1	O75348	118 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	RPP40	O75818	363 aa	Known RBP	4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	KRT18	P05783	430 aa	Known RBP	4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	ANXA6	P08133	673 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	IGFBP2	P18065	325 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	GPT	P24298	496 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	S100A5	P33763	92 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	GCK	P35557	465 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	ACTN2	P35609	894 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	TCF7	P36402	384 aa	Predicted RBP	4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	MATR3	P43243	847 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	FOXL2	P58012	376 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	TAS2R50	P59544	299 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	ARPC4	P59998	168 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	ZXDB	P98169	803 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	RASA2	Q15283	850 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	TAF11	Q15544	211 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	LRRC23	Q53EV4	343 aa	Predicted RBP	4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	WLS	Q5T9L3	541 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	CPLX2	Q6PUV4	134 aa	Known RBP	4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	LRRC31	Q6UY01	552 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	DPP9	Q86TI2	863 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	LURAP1L	Q8IV03	231 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	APLF	Q8IW19	511 aa	Predicted RBP	4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	CCDC170	Q8IYT3	715 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	SLC7A5P1	Q8MH63	180 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	TTC39C	Q8N584	583 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	MAB21L3	Q8N8X9	362 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	CCDC89	Q8N998	374 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	SMRP1	Q8NCR6	262 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	SRFBP1	Q8NEF9	429 aa	Known RBP	4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	APPL2	Q8NEU8	664 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	SUN5	Q8TC36	379 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	OIT3	Q8WWZ8	545 aa		4.87	□□□□□ -1.63
CHD9-206	ENST00000562791	LPAR1	Q92633	364 aa		4.87	□□□□□ -1.63

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