RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 SYPL2Q5VXT5 272 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 LRRC52Q8N7C0 313 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 TMIGD2Q96BF3 282 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 GBA3Q9H227 469 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 PIGVQ9NUD9 493 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 ERI2A8K979 691 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 E7ENX8 843 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 LGALS2P05162 132 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 CD68P34810 354 aaPredicted RBP14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 RALGDSQ12967 914 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 IKBKEQ14164 716 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 KCTD2Q14681 263 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 ITPRIPL1Q6GPH6 555 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 CYP2R1Q6VVX0 501 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 LPCAT2Q7L5N7 544 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 ALDH16A1Q8IZ83 802 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 CRYBG2Q8N1P7 616 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 LZICQ8WZA0 190 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 PPWD1Q96BP3 646 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 NXNL1Q96CM4 212 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 ZNF512Q96ME7 567 aaPredicted RBP14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 OSBPL11Q9BXB4 747 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 LIN28AQ9H9Z2 209 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 LRRC4Q9HBW1 653 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 TRPC7Q9HCX4 862 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 NSMCE4AQ9NXX6 385 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 PIM2Q9P1W9 311 aa14.16□□□□□ -0.14
VPS9D1-202ENST00000561976 H6PDO95479 791 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 CAPNS1P04632 268 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 CCDC166P0CW27 439 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 ZNF23P17027 643 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 NDUFV1P49821 464 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 ZBTB17Q13105 803 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 FBXO47Q5MNV8 452 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 C9orf57Q5W0N0 161 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 KCTD11Q693B1 232 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 CENPLQ8N0S6 344 aaPredicted RBP14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 KDM1BQ8NB78 822 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 WNT8BQ93098 351 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 NPY6RQ99463 290 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 MRPL40Q9NQ50 206 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 MYRFQ9Y2G1 1151 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 PCDHGA7Q9Y5G6 932 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 GMEB1Q9Y692 573 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 LOC285556D6RIA3 1793 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 C9IYK1 514 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 SDHDO14521 159 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 AHSGP02765 367 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 ZNF286BP0CG31 522 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 CYP2C9P11712 490 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 HNRNPLP14866 589 aaKnown RBP eCLIP14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 TKTP29401 623 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 RPL34P49207 117 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 STX5Q13190 355 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 CTBP1Q13363 440 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 Q3C1V9 767 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 MTX3Q5HYI7 312 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 HERC6Q8IVU3 1022 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 NUP93Q8N1F7 819 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 SIX6OS1Q8N1H7 587 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 LPGAT1Q92604 370 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 SNX27Q96L92 541 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 ZNF597Q96LX8 424 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 CIB1Q99828 191 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 PLEKHA5Q9HAU0 1116 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 NCKIPSDQ9NZQ3 722 aa14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 SUCOQ9UBS9 1254 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-202ENST00000561976 ZNF638Q14966 1978 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 HEATR9A2RTY3 570 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 CLDN5O00501 218 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 ADRA1BP35368 520 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 RHDQ02161 417 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 CDH17Q12864 832 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 DCAF4L1Q3SXM0 396 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 AGKQ53H12 422 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 NOL9Q5SY16 702 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 LAYNQ6UX15 382 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 GRIN3AQ8TCU5 1115 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 RMND5BQ96G75 393 aaPredicted RBP14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 MCMBPQ9BTE3 642 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 UNC93B1Q9H1C4 597 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 UTP6Q9NYH9 597 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 CCDC167Q9P0B6 97 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 DERAQ9Y315 318 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 JCHAINP01591 159 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 STMN1P16949 149 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 HDCP19113 662 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 RAB10P61026 200 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 TXNL4AP83876 142 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 MPP1Q00013 466 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 CREB5Q02930 508 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 TMEM62Q0P6H9 643 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 VGLL4Q14135 290 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 PRPSAP1Q14558 356 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 LPIN1Q14693 890 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 NAPEPLDQ6IQ20 393 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 HFE2Q6ZVN8 426 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 ERI1Q8IV48 349 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 DENND6AQ8IWF6 608 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 SULF1Q8IWU6 871 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms