RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 HSF5Q4G112 596 aaPredicted RBP9.95□□□□□ -0.82
SMG1-205ENST00000561947 PRSS55Q6UWB4 352 aaPredicted RBP9.95□□□□□ -0.82
SMG1-205ENST00000561947 ZC3HC1Q86WB0 502 aaKnown RBP9.95□□□□□ -0.82
SMG1-205ENST00000561947 MAGEC3Q8TD91 643 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 IMP4Q96G21 291 aaKnown RBP9.95□□□□□ -0.82
SMG1-205ENST00000561947 PRR11Q96HE9 360 aaPredicted RBP9.95□□□□□ -0.82
SMG1-205ENST00000561947 ARL8BQ9NVJ2 186 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 ZNF212Q9UDV6 495 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 MARCOQ9UEW3 520 aaPredicted RBP9.95□□□□□ -0.82
SMG1-205ENST00000561947 ITM2AO43736 263 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 PQBP1O60828 265 aaKnown RBP9.95□□□□□ -0.82
SMG1-205ENST00000561947 CPA3P15088 417 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 PTPN4P29074 926 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 ARCN1P48444 511 aaKnown RBP9.95□□□□□ -0.82
SMG1-205ENST00000561947 CSRP3P50461 194 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 MNAT1P51948 309 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 AQP5P55064 265 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 IRF9Q00978 393 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 GRM3Q14832 879 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 DLG2Q15700 870 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 UGP2Q16851 508 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 MARC1Q5VT66 337 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 ESRP1Q6NXG1 681 aaKnown RBP9.95□□□□□ -0.82
SMG1-205ENST00000561947 ALYREFQ86V81 257 aaKnown RBP9.95□□□□□ -0.82
SMG1-205ENST00000561947 LRRC43Q8N309 656 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.95□□□□□ -0.82
SMG1-205ENST00000561947 ACVR1CQ8NER5 493 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 GIPC2Q8TF65 315 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 PTCD3Q96EY7 689 aaKnown RBP9.95□□□□□ -0.82
SMG1-205ENST00000561947 SCLYQ96I15 445 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 SIKE1Q9BRV8 207 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 CCSER2Q9H7U1 834 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 CD248Q9HCU0 757 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 NT5MQ9NPB1 228 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 TREX1Q9NSU2 369 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 CDY1Q9Y6F8 540 aa9.95□□□□□ -0.82
SMG1-205ENST00000561947 A8MUI8 341 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 TLR5O60602 858 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 SIN3BO75182 1162 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 LYPLA1O75608 230 aaPredicted RBP9.94□□□□□ -0.82
SMG1-205ENST00000561947 ATP5BP06576 529 aaKnown RBP9.94□□□□□ -0.82
SMG1-205ENST00000561947 RALBP11234 206 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 ATF6P18850 670 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 ARNTP27540 789 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 CHRNA4P43681 627 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 KPNA1P52294 538 aaPredicted RBP9.94□□□□□ -0.82
SMG1-205ENST00000561947 TNK2Q07912 1038 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 SLC10A7Q0GE19 358 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 PCSK7Q16549 785 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 ARMC3Q5W041 872 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 KIAA0930Q6ICG6 404 aaPredicted RBP9.94□□□□□ -0.82
SMG1-205ENST00000561947 TTC7BQ86TV6 843 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 TEX26Q8N6G2 289 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 NSMCE1Q8WV22 266 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 PSMG2Q969U7 264 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 PABPC5Q96DU9 382 aaKnown RBP9.94□□□□□ -0.82
SMG1-205ENST00000561947 NSL1Q96IY1 281 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 RPRD1AQ96P16 312 aaPredicted RBP9.94□□□□□ -0.82
SMG1-205ENST00000561947 KLHL5Q96PQ7 755 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 TTLL2Q9BWV7 592 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 TBC1D10AQ9BXI6 508 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 PRKD2Q9BZL6 878 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 UBE2OQ9C0C9 1292 aaKnown RBP9.94□□□□□ -0.82
SMG1-205ENST00000561947 NMUR2Q9GZQ4 415 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 ATXN3LQ9H3M9 355 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 ARNT2Q9HBZ2 717 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 ATP13A1Q9HD20 1204 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 VPS45Q9NRW7 570 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 SLC2A6Q9UGQ3 507 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 SLC39A10Q9ULF5 831 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 ANKRD6Q9Y2G4 727 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 DNAJC16Q9Y2G8 782 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 RAMP2O60895 175 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 VAPBO95292 243 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 AHSGP02765 367 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 CXCL10P02778 98 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 PAMP19021 973 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 GABRB3P28472 473 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 MAPKAPK2P49137 400 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 IL10RBQ08334 325 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 MTA1Q13330 715 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 SEPT6Q14141 434 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 POLD3Q15054 466 aaPredicted RBP9.94□□□□□ -0.82
SMG1-205ENST00000561947 PARP15Q460N3 678 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 NADSYN1Q6IA69 706 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 KDELC2Q7Z4H8 507 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 CIR1Q86X95 450 aaPredicted RBP9.94□□□□□ -0.82
SMG1-205ENST00000561947 ZNF354CQ86Y25 554 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 WDR75Q8IWA0 830 aaKnown RBP9.94□□□□□ -0.82
SMG1-205ENST00000561947 FBXO22Q8NEZ5 403 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 OR6Y1Q8NGX8 325 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 PIWIL2Q8TC59 973 aaKnown RBP9.94□□□□□ -0.82
SMG1-205ENST00000561947 TLE6Q9H808 572 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 CHD5Q8TDI0 1954 aa9.94□□□□□ -0.82
SMG1-205ENST00000561947 ADAM12O43184 909 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 MMP2P08253 660 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 TACR2P21452 398 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 CALB2P22676 271 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 CD86P42081 329 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 POLD2P49005 469 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms