RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 LIMS2Q7Z4I7 341 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 TADA2BQ86TJ2 420 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 ADIPOR2Q86V24 386 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 DENND1CQ8IV53 801 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 AHI1Q8N157 1196 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 AADATQ8N5Z0 425 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 B3GALNT2Q8NCR0 500 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 CXorf38Q8TB03 319 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 NOC3LQ8WTT2 800 aaKnown RBP5.5□□□□□ -1.53
HERC1-213ENST00000561359 PDCD6IPQ8WUM4 868 aaKnown RBP5.5□□□□□ -1.53
HERC1-213ENST00000561359 FBLIM1Q8WUP2 373 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 NAT6Q93015 286 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 CATSPER2Q96P56 530 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 CCDC3Q9BQI4 270 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 MRPL45Q9BRJ2 306 aaKnown RBP5.5□□□□□ -1.53
HERC1-213ENST00000561359 DCLK3Q9C098 648 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 ZHX3Q9H4I2 956 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 PRDM8Q9NQV8 689 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 COMMD8Q9NX08 183 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 OSER1Q9NX31 292 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 RBAKQ9NYW8 714 aaPredicted RBP5.5□□□□□ -1.53
HERC1-213ENST00000561359 IL37Q9NZH6 218 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 ARHGAP20Q9P2F6 1191 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 CYTH4Q9UIA0 394 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 GGA2Q9UJY4 613 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 ITGB1BP2Q9UKP3 347 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 AGO1Q9UL18 857 aaKnown RBP5.5□□□□□ -1.53
HERC1-213ENST00000561359 AP4E1Q9UPM8 1137 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 LOXL2Q9Y4K0 774 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 MYH10P35580 1976 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 A0A1W2PQH9 124 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 ARHGAP10A1A4S6 786 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 FAM92AA1XBS5 289 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 EFCAB7A8K855 629 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 ZNF891A8MT65 544 aaPredicted RBP5.49□□□□□ -1.53
HERC1-213ENST00000561359 A8MXQ7 604 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 C10orf142B7Z368 130 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 SLC31A1O15431 190 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 HNRNPRO43390 633 aaKnown RBP5.49□□□□□ -1.53
HERC1-213ENST00000561359 PRPF6O94906 941 aaKnown RBP5.49□□□□□ -1.53
HERC1-213ENST00000561359 PLA2G4BP0C869 781 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 PRKAR1AP10644 381 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 PABPC1P11940 636 aaKnown RBP5.49□□□□□ -1.53
HERC1-213ENST00000561359 ITIH1P19827 911 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 RAB6AP20340 208 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 C5AR1P21730 350 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 HOXD9P28356 352 aaPredicted RBP5.49□□□□□ -1.53
HERC1-213ENST00000561359 MAPK10P53779 464 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 COG7P83436 770 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 SEPT6Q14141 434 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 FGL2Q14314 439 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 EIF2S3LQ2VIR3 472 aaKnown RBP5.49□□□□□ -1.53
HERC1-213ENST00000561359 HNRNPA1L2Q32P51 320 aaKnown RBP5.49□□□□□ -1.53
HERC1-213ENST00000561359 CDPF1Q6NVV7 123 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 KLHDC10Q6PID8 442 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 RUFY3Q7L099 469 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 TIPARPQ7Z3E1 657 aaKnown RBP5.49□□□□□ -1.53
HERC1-213ENST00000561359 DTX1Q86Y01 620 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 BRSK2Q8IWQ3 736 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 ZC3H3Q8IXZ2 948 aaKnown RBP5.49□□□□□ -1.53
HERC1-213ENST00000561359 SLC34A3Q8N130 599 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 SYT2Q8N9I0 419 aaPredicted RBP5.49□□□□□ -1.53
HERC1-213ENST00000561359 ZNF548Q8NEK5 533 aaPredicted RBP5.49□□□□□ -1.53
HERC1-213ENST00000561359 CPT1CQ8TCG5 803 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 KCNN1Q92952 543 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 KCNB2Q92953 911 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 USP7Q93009 1102 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 SAAL1Q96ER3 474 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 SMARCD1Q96GM5 515 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 ANKRD36BP1Q96IX9 119 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 PPP1R13BQ96KQ4 1090 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 GFM1Q96RP9 751 aaKnown RBP5.49□□□□□ -1.53
HERC1-213ENST00000561359 PLIN2Q99541 437 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 IL12RB2Q99665 862 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 PARVGQ9HBI0 331 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 PDE11AQ9HCR9 933 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 KRT82Q9NSB4 513 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.49□□□□□ -1.53
HERC1-213ENST00000561359 KCND2Q9NZV8 630 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 FOXJ2Q9P0K8 574 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 GPN3Q9UHW5 284 aaPredicted RBP5.49□□□□□ -1.53
HERC1-213ENST00000561359 RASAL2Q9UJF2 1139 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 TP53TG5Q9Y2B4 290 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 NME7Q9Y5B8 376 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 CYP46A1Q9Y6A2 500 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 STYXL1Q9Y6J8 313 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 TDRD6O60522 2096 aaKnown RBP5.49□□□□□ -1.53
HERC1-213ENST00000561359 DOCK9Q9BZ29 2069 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 CSMD2Q7Z408 3487 aa5.49□□□□□ -1.53
HERC1-213ENST00000561359 GOLGA8IPA6NC78 632 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 GOLGA8JA6NMD2 632 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 D6RAR5 112 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 STMND1H3BQB6 276 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 NTN3O00634 580 aaPredicted RBP5.48□□□□□ -1.53
HERC1-213ENST00000561359 AQP9O43315 295 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 RNGTTO60942 597 aaKnown RBP5.48□□□□□ -1.53
HERC1-213ENST00000561359 TACC1O75410 805 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 IL1BP01584 269 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 TNNC2P02585 160 aa5.48□□□□□ -1.53
HERC1-213ENST00000561359 KRT18P05783 430 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms