RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 NCAPGQ9BPX3 1015 aa16.29■□□□□ 0.2
LMX1B-204ENST00000561065 PARVAQ9NVD7 372 aa16.29■□□□□ 0.2
LMX1B-204ENST00000561065 TMEM248Q9NWD8 314 aa16.29■□□□□ 0.2
LMX1B-204ENST00000561065 DONSONQ9NYP3 566 aa16.29■□□□□ 0.2
LMX1B-204ENST00000561065 DNAI1Q9UI46 699 aa16.29■□□□□ 0.2
LMX1B-204ENST00000561065 CELSR3Q9NYQ7 3312 aa16.29■□□□□ 0.2
LMX1B-204ENST00000561065 ARID1BQ8NFD5 2236 aaPredicted RBP16.29■□□□□ 0.2
LMX1B-204ENST00000561065 TRPM6Q9BX84 2022 aa16.29■□□□□ 0.2
LMX1B-204ENST00000561065 FAM221BA6H8Z2 402 aa16.28■□□□□ 0.2
LMX1B-204ENST00000561065 LEFTY1O75610 366 aa16.28■□□□□ 0.2
LMX1B-204ENST00000561065 PLEKP08567 350 aaPredicted RBP16.28■□□□□ 0.2
LMX1B-204ENST00000561065 RHOQP17081 205 aa16.28■□□□□ 0.2
LMX1B-204ENST00000561065 PRKCIP41743 596 aa16.28■□□□□ 0.2
LMX1B-204ENST00000561065 ARSIQ5FYB1 569 aa16.28■□□□□ 0.2
LMX1B-204ENST00000561065 RWDD4Q6NW29 188 aaKnown RBP16.28■□□□□ 0.2
LMX1B-204ENST00000561065 KDF1Q8NAX2 398 aaPredicted RBP16.28■□□□□ 0.2
LMX1B-204ENST00000561065 TMIEQ8NEW7 156 aa16.28■□□□□ 0.2
LMX1B-204ENST00000561065 RHBDD1Q8TEB9 315 aa16.28■□□□□ 0.2
LMX1B-204ENST00000561065 ARHGEF2Q92974 986 aaKnown RBP16.28■□□□□ 0.2
LMX1B-204ENST00000561065 TBC1D31Q96DN5 1066 aa16.28■□□□□ 0.2
LMX1B-204ENST00000561065 CEP44Q9C0F1 390 aa16.28■□□□□ 0.2
LMX1B-204ENST00000561065 NOL6Q9H6R4 1146 aaKnown RBP16.28■□□□□ 0.2
LMX1B-204ENST00000561065 CAAP1Q9H8G2 361 aa16.28■□□□□ 0.2
LMX1B-204ENST00000561065 PREBQ9HCU5 417 aa16.28■□□□□ 0.2
LMX1B-204ENST00000561065 IL36AQ9UHA7 158 aa16.28■□□□□ 0.2
LMX1B-204ENST00000561065 ZMIZ1Q9ULJ6 1067 aa16.28■□□□□ 0.2
LMX1B-204ENST00000561065 ATMINO43313 823 aaPredicted RBP16.27■□□□□ 0.2
LMX1B-204ENST00000561065 RNGTTO60942 597 aaKnown RBP16.27■□□□□ 0.2
LMX1B-204ENST00000561065 PRNPP04156 253 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 MYBL1P10243 752 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 PRLRP16471 622 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 EPHA8P29322 1005 aaPredicted RBP16.27■□□□□ 0.2
LMX1B-204ENST00000561065 ETFBP38117 255 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 GRK6P43250 576 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 MAPKAPK2P49137 400 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 CCNHP51946 323 aaPredicted RBP16.27■□□□□ 0.2
LMX1B-204ENST00000561065 ZNF143P52747 638 aaPredicted RBP16.27■□□□□ 0.2
LMX1B-204ENST00000561065 AIF1P55008 147 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 ZBED6P86452 979 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 RETSATQ6NUM9 610 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 MCOLN2Q8IZK6 566 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 PCDH20Q8N6Y1 951 aaKnown RBP16.27■□□□□ 0.2
LMX1B-204ENST00000561065 TMEM145Q8NBT3 493 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 OR6K2Q8NGY2 324 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 KLK6Q92876 244 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 CCDC114Q96M63 670 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 MYOCQ99972 504 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 TM6SF2Q9BZW4 377 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 TTYH3Q9C0H2 523 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 HAUS4Q9H6D7 363 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 MRPL47Q9HD33 250 aaKnown RBP16.27■□□□□ 0.2
LMX1B-204ENST00000561065 FZD3Q9NPG1 666 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 GDF3Q9NR23 364 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 IFNKQ9P0W0 207 aa16.27■□□□□ 0.2
LMX1B-204ENST00000561065 TPX2Q9ULW0 747 aaKnown RBP16.27■□□□□ 0.2
LMX1B-204ENST00000561065 ZFR2Q9UPR6 939 aaKnown RBP16.27■□□□□ 0.2
LMX1B-204ENST00000561065 FARP1Q9Y4F1 1045 aaPredicted RBP16.27■□□□□ 0.2
LMX1B-204ENST00000561065 A0A1W2PQU0 124 aa16.26■□□□□ 0.19
LMX1B-204ENST00000561065 TLR4O00206 839 aa16.26■□□□□ 0.19
LMX1B-204ENST00000561065 GKP32189 559 aa16.26■□□□□ 0.19
LMX1B-204ENST00000561065 TRIM14Q14142 442 aa16.26■□□□□ 0.19
LMX1B-204ENST00000561065 ZNF284Q2VY69 593 aa16.26■□□□□ 0.19
LMX1B-204ENST00000561065 SEL1L3Q68CR1 1132 aa16.26■□□□□ 0.19
LMX1B-204ENST00000561065 LEKR1Q6ZMV7 388 aa16.26■□□□□ 0.19
LMX1B-204ENST00000561065 ERN2Q76MJ5 926 aaKnown RBP16.26■□□□□ 0.19
LMX1B-204ENST00000561065 PARS2Q7L3T8 475 aaKnown RBP16.26■□□□□ 0.19
LMX1B-204ENST00000561065 KANSL1Q7Z3B3 1105 aa16.26■□□□□ 0.19
LMX1B-204ENST00000561065 PRPF39Q86UA1 669 aaKnown RBP16.26■□□□□ 0.19
LMX1B-204ENST00000561065 MFSD2AQ8NA29 543 aa16.26■□□□□ 0.19
LMX1B-204ENST00000561065 SAP25Q8TEE9 199 aa16.26■□□□□ 0.19
LMX1B-204ENST00000561065 CDC6Q99741 560 aa16.26■□□□□ 0.19
LMX1B-204ENST00000561065 KLC2Q9H0B6 622 aa16.26■□□□□ 0.19
LMX1B-204ENST00000561065 ZNHIT6Q9NWK9 470 aaKnown RBP16.26■□□□□ 0.19
LMX1B-204ENST00000561065 CAPN11Q9UMQ6 739 aa16.26■□□□□ 0.19
LMX1B-204ENST00000561065 DMTF1Q9Y222 760 aa16.26■□□□□ 0.19
LMX1B-204ENST00000561065 APOBEC2Q9Y235 224 aaKnown RBP16.26■□□□□ 0.19
LMX1B-204ENST00000561065 SCINQ9Y6U3 715 aa16.26■□□□□ 0.19
LMX1B-204ENST00000561065 CHD6Q8TD26 2715 aa16.26■□□□□ 0.19
LMX1B-204ENST00000561065 PKD1L2Q7Z442 2459 aa16.25■□□□□ 0.19
LMX1B-204ENST00000561065 GOLGA8CPA6NN73 597 aa16.25■□□□□ 0.19
LMX1B-204ENST00000561065 TMCO5BA8MYB1 307 aa16.25■□□□□ 0.19
LMX1B-204ENST00000561065 CAPNS1P04632 268 aa16.25■□□□□ 0.19
LMX1B-204ENST00000561065 SERPING1P05155 500 aa16.25■□□□□ 0.19
LMX1B-204ENST00000561065 CCDC15Q0P6D6 951 aa16.25■□□□□ 0.19
LMX1B-204ENST00000561065 SUZ12Q15022 739 aaKnown RBP16.25■□□□□ 0.19
LMX1B-204ENST00000561065 TMEM259Q4ZIN3 620 aa16.25■□□□□ 0.19
LMX1B-204ENST00000561065 SETMARQ53H47 684 aaPredicted RBP16.25■□□□□ 0.19
LMX1B-204ENST00000561065 TDRD12Q587J7 1177 aaKnown RBP16.25■□□□□ 0.19
LMX1B-204ENST00000561065 CARD16Q5EG05 197 aa16.25■□□□□ 0.19
LMX1B-204ENST00000561065 SLFN11Q7Z7L1 901 aa16.25■□□□□ 0.19
LMX1B-204ENST00000561065 HORMAD1Q86X24 394 aa16.25■□□□□ 0.19
LMX1B-204ENST00000561065 MARCH9Q86YJ5 346 aa16.25■□□□□ 0.19
LMX1B-204ENST00000561065 ZCCHC14Q8WYQ9 949 aaKnown RBP16.25■□□□□ 0.19
LMX1B-204ENST00000561065 CNPY3Q9BT09 278 aa16.25■□□□□ 0.19
LMX1B-204ENST00000561065 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.25■□□□□ 0.19
LMX1B-204ENST00000561065 HDAC8Q9BY41 377 aa16.25■□□□□ 0.19
LMX1B-204ENST00000561065 TRIM7Q9C029 511 aa16.25■□□□□ 0.19
LMX1B-204ENST00000561065 FZD10Q9ULW2 581 aa16.25■□□□□ 0.19
LMX1B-204ENST00000561065 LRRK1Q38SD2 2015 aa16.25■□□□□ 0.19
LMX1B-204ENST00000561065 TDRD6O60522 2096 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms