RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 SLC1A6P48664 564 aa14.18□□□□□ -0.14
RABGGTA-220ENST00000560998 SLC5A3P53794 718 aa14.18□□□□□ -0.14
RABGGTA-220ENST00000560998 HUNKP57058 714 aa14.18□□□□□ -0.14
RABGGTA-220ENST00000560998 PURAQ00577 322 aaKnown RBP14.18□□□□□ -0.14
RABGGTA-220ENST00000560998 CYTH1Q15438 398 aa14.18□□□□□ -0.14
RABGGTA-220ENST00000560998 NEPROQ6NW34 567 aa14.18□□□□□ -0.14
RABGGTA-220ENST00000560998 RASAL3Q86YV0 1011 aa14.18□□□□□ -0.14
RABGGTA-220ENST00000560998 B3GALNT2Q8NCR0 500 aa14.18□□□□□ -0.14
RABGGTA-220ENST00000560998 ADAMTS16Q8TE57 1224 aa14.18□□□□□ -0.14
RABGGTA-220ENST00000560998 TNIP3Q96KP6 325 aa14.18□□□□□ -0.14
RABGGTA-220ENST00000560998 ZNF778Q96MU6 729 aa14.18□□□□□ -0.14
RABGGTA-220ENST00000560998 KCTD15Q96SI1 283 aaPredicted RBP14.18□□□□□ -0.14
RABGGTA-220ENST00000560998 PAIP1Q9H074 479 aaKnown RBP14.18□□□□□ -0.14
RABGGTA-220ENST00000560998 CLK4Q9HAZ1 481 aaKnown RBP14.18□□□□□ -0.14
RABGGTA-220ENST00000560998 MTMR10Q9NXD2 777 aa14.18□□□□□ -0.14
RABGGTA-220ENST00000560998 UTP6Q9NYH9 597 aaKnown RBP14.18□□□□□ -0.14
RABGGTA-220ENST00000560998 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.18□□□□□ -0.14
RABGGTA-220ENST00000560998 AP4E1Q9UPM8 1137 aa14.18□□□□□ -0.14
RABGGTA-220ENST00000560998 RNF11Q9Y3C5 154 aa14.18□□□□□ -0.14
RABGGTA-220ENST00000560998 CYB561D2O14569 222 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 MAP3K6O95382 1288 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 FUCA1P04066 466 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 MAGEA6P43360 314 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 MRPS22P82650 360 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 MOGQ16653 247 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 FASTKD1Q53R41 847 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 FAM182AQ5T1J6 154 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 TWF2Q6IBS0 349 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 SLC2A7Q6PXP3 512 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 C17orf99Q6UX52 265 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 BNC2Q6ZN30 1099 aaPredicted RBP14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 SETD3Q86TU7 594 aaPredicted RBP14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 CDKL3Q8IVW4 592 aaPredicted RBP14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 CTAGE3PQ8IX95 158 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 CCDC185Q8N715 623 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 PPM1NQ8N819 430 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 ACMSDQ8TDX5 336 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 THAP11Q96EK4 314 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 APBA2Q99767 749 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 MAGEB5Q9BZ81 275 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 SLC13A1Q9BZW2 595 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 COPS7BQ9H9Q2 264 aaPredicted RBP14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 LIN28AQ9H9Z2 209 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 ATAD3AQ9NVI7 634 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 GID8Q9NWU2 228 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 GTF2IRD1Q9UHL9 959 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 GIT1Q9Y2X7 761 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 TRPM7Q96QT4 1865 aa14.17□□□□□ -0.14
RABGGTA-220ENST00000560998 MANSC4A6NHS7 340 aaPredicted RBP14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 FAM155AB1AL88 458 aaPredicted RBP14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 INHBBP09529 407 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 ZNF26P17031 533 aaPredicted RBP14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 NEK2P51955 445 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 GBE1Q04446 702 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 SLC10A2Q12908 348 aaPredicted RBP14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 FAXCQ5TGI0 409 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 KRT80Q6KB66 452 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 ISLR2Q6UXK2 745 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 STRADAQ7RTN6 431 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 PIGZQ86VD9 579 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 NDUFAF2Q8N183 169 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 TMEM102Q8N9M5 508 aaPredicted RBP14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 TMIGD2Q96BF3 282 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 C12orf43Q96C57 262 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 CSPG4P5Q96PW8 444 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 DOK1Q99704 481 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 PKP2Q99959 881 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 TDRD1Q9BXT4 1180 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 DUSP16Q9BY84 665 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 K7EPI3 171 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 PSMD12O00232 456 aaPredicted RBP14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 AVILO75366 819 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 SULT1C4O75897 302 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 BCAS2O75934 225 aaPredicted RBP14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 ZBTB11O95625 1053 aaPredicted RBP14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 FGF3P11487 239 aaPredicted RBP14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 MATKP42679 507 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 NR2C2P49116 596 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 YWHAZP63104 245 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 KLF10Q13118 480 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 PDK1Q15118 436 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 NDUFA5Q16718 116 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 RGS21Q2M5E4 152 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 ANKDD1AQ495B1 522 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 PIGGQ5H8A4 983 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 ITPRIPL1Q6GPH6 555 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 TAF2Q6P1X5 1199 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 C16orf46Q6P387 395 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 C16orf87Q6PH81 154 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 ZNF354CQ86Y25 554 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 CLVS1Q8IUQ0 354 aaPredicted RBP14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 LILRA2Q8N149 483 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 TNIP2Q8NFZ5 429 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 TBC1D15Q8TC07 691 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 PDCD6IPQ8WUM4 868 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 LRRN4Q8WUT4 740 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 STARD8Q92502 1023 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 LRRC39Q96DD0 335 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 HEPHQ9BQS7 1158 aa14.16□□□□□ -0.14
RABGGTA-220ENST00000560998 MYADML2A6NDP7 307 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms