RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 PRPF19Q9UMS4 504 aaKnown RBP13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 RAP2CQ9Y3L5 183 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 DPEP1P16444 411 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 KLRK1P26718 216 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 RHAGQ02094 409 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 PRKG2Q13237 762 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 PFKFB4Q16877 469 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 UNC5AQ6ZN44 842 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 USP45Q70EL2 814 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 SH3RF1Q7Z6J0 888 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 OFCC1Q8IZS5 231 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 OSBPL11Q9BXB4 747 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 POLR1BQ9H9Y6 1135 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 PNPLA3Q9NST1 481 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 COMMD9Q9P000 198 aa13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 TIMM13Q9Y5L4 95 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P11-201ENST00000560634 MTRF1O75570 445 aaKnown RBP13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 ATP4AP20648 1035 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 PTDSS1P48651 473 aaKnown RBP13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 IRAK1BP1Q5VVH5 260 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 SLC25A24Q6NUK1 477 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 CYP20A1Q6UW02 462 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 BPIFB6Q8NFQ5 453 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 SLC38A2Q96QD8 506 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 MTG1Q9BT17 334 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 C2orf49Q9BVC5 232 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 SEMA4BQ9NPR2 832 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 QSOX1O00391 747 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 HAT1O14929 419 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 SPTLC1O15269 473 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 MGRN1O60291 552 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 TSPAN3O60637 253 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 TFRCP02786 760 aaKnown RBP13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 CYP1A2P05177 515 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 TLX1P31314 330 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 TTMPQ5BVD1 217 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 SMYD1Q8NB12 490 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 SPATA20Q8TB22 786 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 FAIM2Q9BWQ8 316 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 ALG9Q9H6U8 611 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 SYNPO2Q9UMS6 1093 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 PCDHA11Q9Y5I1 949 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 LRRC14BA6NHZ5 514 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 ULK1O75385 1050 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 CYP3A4P08684 503 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 CCDC166P0CW27 439 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 TPP2P29144 1249 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 ZNF143P52747 638 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 CDH8P55286 799 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 ROR2Q01974 943 aaKnown RBP13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 BST1Q10588 318 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 SPIDRQ14159 915 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 ZNF549Q6P9A3 640 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 ARMC8Q8IUR7 673 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 ZNF655Q8N720 491 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 PTGR2Q8N8N7 351 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 KAT5Q92993 513 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 MRPL57Q9BQC6 102 aaKnown RBP13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 PIH1D1Q9NWS0 290 aaKnown RBP13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 POLLQ9UGP5 575 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 TDRKHQ9Y2W6 561 aaKnown RBP13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 C1orf167Q5SNV9 1468 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 FAM237BA0A1B0GVD1 139 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 LIASO43766 372 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 MTA2O94776 668 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 ITGAVP06756 1048 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 PAX3P23760 479 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 SLC25A3Q00325 362 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 ACOX1Q15067 660 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 PABPC1LQ4VXU2 614 aaKnown RBP13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 CCDC80Q76M96 950 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 BAP1Q92560 729 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 STARD7Q9NQZ5 370 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 ANGPT4Q9Y264 503 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 AK5Q9Y6K8 562 aa13.35□□□□□ -0.27
CSPG4P11-201ENST00000560634 FAM86B1E9PN63 330 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 CXCL11O14625 94 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 USP12O75317 370 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 NUDT14O95848 222 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 SERPINA6P08185 405 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 FAM86B2P0C5J1 330 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 NPR3P17342 541 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 TTPAP49638 278 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 SRP54P61011 504 aaKnown RBP13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 KAZALD1Q96I82 304 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 VPS35Q96QK1 796 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 ULBP1Q9BZM6 244 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 ACSS3Q9H6R3 686 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 NUDT5Q9UKK9 219 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 DDTLA6NHG4 134 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 CBFA2T3O75081 653 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 POMCP01189 267 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 ENO2P09104 434 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 CRATP43155 626 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 SETMARQ53H47 684 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 BBS12Q6ZW61 710 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 ALLCQ8N6M5 410 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 ZHX1-C8orf76Q96EF9 292 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 ABHD16BQ9H3Z7 469 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms