RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 LRRC31Q6UY01 552 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 KYAT3Q6YP21 454 aaKnown RBP10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 TFAP2DQ7Z6R9 452 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 ABI3BPQ7Z7G0 1075 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 CREBRFQ8IUR6 639 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 TMIEQ8NEW7 156 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 OR2A12Q8NGT7 310 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 FAM174AQ8TBP5 190 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 ZNF606Q8WXB4 792 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 TTC9Q92623 222 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 ALG14Q96F25 216 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 IFT43Q96FT9 208 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 FEM1CQ96JP0 617 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 CEP63Q96MT8 703 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 GSDMAQ96QA5 445 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 SPON2Q9BUD6 331 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 SLC17A9Q9BYT1 436 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 INTS2Q9H0H0 1204 aaKnown RBP10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 ZDHHC6Q9H6R6 413 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 VPS51Q9UID3 782 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 HOOK1Q9UJC3 728 aaKnown RBP10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 DOLKQ9UPQ8 538 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 ENTPD2Q9Y5L3 495 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 HS3ST4Q9Y661 456 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 K7ENP7 123 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 AGRPO00253 132 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 SMAD6O43541 496 aaKnown RBP10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 HSF2BPO75031 334 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 PAGE1O75459 146 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 LEFTY1O75610 366 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 CNTN5O94779 1100 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 GIMD1P0DJR0 217 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 RABIFP47224 123 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 THOP1P52888 689 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 MTA1Q13330 715 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 SPIDRQ14159 915 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 FZD2Q14332 565 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 ARHGAP44Q17R89 818 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 KIAA1161Q6NSJ0 714 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 INO80CQ6PI98 192 aaPredicted RBP10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 C14orf80Q86SX3 495 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 EHBP1Q8NDI1 1231 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 TPCN2Q8NHX9 752 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 WDR36Q8NI36 951 aaKnown RBP10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 STK32AQ8WU08 396 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 PPP1R13BQ96KQ4 1090 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 BMFQ96LC9 184 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 KREMEN1Q96MU8 473 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 SLC46A1Q96NT5 459 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 EPB41L5Q9HCM4 733 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 APOBEC3BQ9UH17 382 aaKnown RBP10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 HS3ST2Q9Y278 367 aa10.71□□□□□ -0.69
CDC42BPB-207ENST00000560492 CHD5Q8TDI0 1954 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 COL27A1Q8IZC6 1860 aaPredicted RBP10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 PIEZO2Q9H5I5 2752 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 CCDC187A0A096LP49 1063 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 LY6G6EA0A0G2JKS1 128 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 SPTY2D1-AS1A0A0U1RR47 76 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 PMS2P1A4D2B8 440 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 CYSRT1A8MQ03 144 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 RAD51BO15315 384 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 P4HA2O15460 535 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 AFPP02771 609 aaKnown RBP10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 CSF2P04141 144 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 ANXA6P08133 673 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 ADRB3P13945 408 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 NME1P15531 152 aaKnown RBP10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 OR1E1P30953 314 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 RPL34P49207 117 aaKnown RBP10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 SULT1E1P49888 294 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 RNASE9P60153 205 aaKnown RBP10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 C1orf61Q13536 156 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 TCEA2Q15560 299 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 TMEM259Q4ZIN3 620 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 COBLL1Q53SF7 1204 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 PRRT3Q5FWE3 981 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 PERM1Q5SV97 790 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 FAXCQ5TGI0 409 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 ESRP1Q6NXG1 681 aaKnown RBP10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 DPY19L3Q6ZPD9 716 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 C11orf57Q6ZUT1 292 aaPredicted RBP10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 FAM183BPQ6ZVS7 135 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 USP53Q70EK8 1073 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 TMEM110Q86TL2 294 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 RBFAQ8N0V3 343 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 DCAF4L2Q8NA75 395 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 BTN2A2Q8WVV5 523 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 NAT6Q93015 286 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 GRAMD1AQ96CP6 724 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 CCNL2Q96S94 520 aaPredicted RBP10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 CPXM1Q96SM3 734 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 PSMB7Q99436 277 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 HDAC8Q9BY41 377 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 SLC13A1Q9BZW2 595 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 TKTL2Q9H0I9 626 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 WDCPQ9H6R7 721 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 ACP6Q9NPH0 428 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 MPP6Q9NZW5 540 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 SPASTQ9UBP0 616 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 GULP1Q9UBP9 304 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms