RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 RCOR3Q9P2K3 495 aaPredicted RBP6.66□□□□□ -1.34
HERC1-208ENST00000560462 SUN2Q9UH99 717 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 PILRAQ9UKJ1 303 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 ZNF451Q9Y4E5 1061 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 PCDHGA9Q9Y5G4 932 aaKnown RBP6.66□□□□□ -1.34
HERC1-208ENST00000560462 B3GALT1Q9Y5Z6 326 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 RNF215Q9Y6U7 377 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 A0A087WWV3 80 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 FRMD3A2A2Y4 597 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 LACTBL1A8MY62 500 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 KPNA7A9QM74 516 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 FANCGO15287 622 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 EIF4EBP3O60516 100 aaPredicted RBP6.65□□□□□ -1.34
HERC1-208ENST00000560462 GHRHP01286 108 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 CLTAP09496 248 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 FURINP09958 794 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 FGF3P11487 239 aaPredicted RBP6.65□□□□□ -1.34
HERC1-208ENST00000560462 BDNFP23560 247 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 LIFRP42702 1097 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 SMCPP49901 116 aaPredicted RBP6.65□□□□□ -1.34
HERC1-208ENST00000560462 TUBP50607 506 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 PCDH1Q08174 1060 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 ABHD18Q0P651 414 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 ERV3-1Q14264 604 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 LAPTM4AQ15012 233 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 LONRF2Q1L5Z9 754 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 PAPD7Q5XG87 772 aaKnown RBP6.65□□□□□ -1.34
HERC1-208ENST00000560462 SYNE3Q6ZMZ3 975 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 TRIM69Q86WT6 500 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 MMAAQ8IVH4 418 aaKnown RBP6.65□□□□□ -1.34
HERC1-208ENST00000560462 UBE2Q2Q8WVN8 375 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 ART4Q93070 314 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 TSPAN18Q96SJ8 248 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 EIF2AK1Q9BQI3 630 aaKnown RBP6.65□□□□□ -1.34
HERC1-208ENST00000560462 DDA1Q9BW61 102 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 KRTAP17-1Q9BYP8 105 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 C22orf23Q9BZE7 217 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 CHMP4BQ9H444 224 aaKnown RBP6.65□□□□□ -1.34
HERC1-208ENST00000560462 MTG2Q9H4K7 406 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 KCNMB3Q9NPA1 279 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 MAGEC2Q9UBF1 373 aaPredicted RBP6.65□□□□□ -1.34
HERC1-208ENST00000560462 PCDHB14Q9Y5E9 798 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 MRPS18BQ9Y676 258 aaKnown RBP6.65□□□□□ -1.34
HERC1-208ENST00000560462 TAF6LQ9Y6J9 622 aa6.65□□□□□ -1.34
HERC1-208ENST00000560462 TNRC6AQ8NDV7 1962 aaKnown RBP6.65□□□□□ -1.34
HERC1-208ENST00000560462 TDRD6O60522 2096 aaKnown RBP6.64□□□□□ -1.35
HERC1-208ENST00000560462 A0A0G2JK05 382 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 F8VP50 259 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 XRCC6P12956 609 aaKnown RBP eCLIP6.64□□□□□ -1.35
HERC1-208ENST00000560462 NFKBIAP25963 317 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 PSMD8P48556 350 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 ADAM8P78325 824 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 KRT83P78385 493 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 PPP2R2BQ00005 443 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 FOXM1Q08050 763 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 SEMA5AQ13591 1074 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 ZC3H12BQ5HYM0 836 aaKnown RBP6.64□□□□□ -1.35
HERC1-208ENST00000560462 RINT1Q6NUQ1 792 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 LINGO4Q6UY18 593 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.64□□□□□ -1.35
HERC1-208ENST00000560462 RIPOR1Q6ZS17 1223 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 TRIM46Q7Z4K8 759 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 MRGPRGQ86SM5 289 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 TMEM135Q86UB9 458 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 PARGQ86W56 976 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 DCP2Q8IU60 420 aaKnown RBP6.64□□□□□ -1.35
HERC1-208ENST00000560462 TRIM22Q8IYM9 498 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 PDCL2Q8N4E4 241 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 ZNF808Q8N4W9 903 aaPredicted RBP6.64□□□□□ -1.35
HERC1-208ENST00000560462 OVCA2Q8WZ82 227 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 FBXO32Q969P5 355 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 ZBTB45Q96K62 511 aaPredicted RBP6.64□□□□□ -1.35
HERC1-208ENST00000560462 NOX5Q96PH1 765 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 HSD17B14Q9BPX1 270 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 SLC2A11Q9BYW1 496 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 CCM2LQ9NUG4 571 aaPredicted RBP6.64□□□□□ -1.35
HERC1-208ENST00000560462 GULP1Q9UBP9 304 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 CHORDC1Q9UHD1 332 aaPredicted RBP6.64□□□□□ -1.35
HERC1-208ENST00000560462 CLEC4EQ9ULY5 219 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 SOX13Q9UN79 622 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 COPG1Q9Y678 874 aaKnown RBP6.64□□□□□ -1.35
HERC1-208ENST00000560462 VPS13CQ709C8 3753 aa6.64□□□□□ -1.35
HERC1-208ENST00000560462 A0A1W2PQH9 124 aa6.63□□□□□ -1.35
HERC1-208ENST00000560462 CDC14CA4D256 554 aa6.63□□□□□ -1.35
HERC1-208ENST00000560462 HGSO14964 777 aaPredicted RBP6.63□□□□□ -1.35
HERC1-208ENST00000560462 SLC31A1O15431 190 aa6.63□□□□□ -1.35
HERC1-208ENST00000560462 MSI1O43347 362 aaKnown RBP6.63□□□□□ -1.35
HERC1-208ENST00000560462 SIN3BO75182 1162 aa6.63□□□□□ -1.35
HERC1-208ENST00000560462 TOM1L1O75674 476 aa6.63□□□□□ -1.35
HERC1-208ENST00000560462 S100BP04271 92 aaPredicted RBP6.63□□□□□ -1.35
HERC1-208ENST00000560462 CYBBP04839 570 aa6.63□□□□□ -1.35
HERC1-208ENST00000560462 ANXA6P08133 673 aa6.63□□□□□ -1.35
HERC1-208ENST00000560462 STSP08842 583 aa6.63□□□□□ -1.35
HERC1-208ENST00000560462 DLDP09622 509 aaKnown RBP6.63□□□□□ -1.35
HERC1-208ENST00000560462 PRLRP16471 622 aa6.63□□□□□ -1.35
HERC1-208ENST00000560462 C5AR1P21730 350 aa6.63□□□□□ -1.35
HERC1-208ENST00000560462 YWHAQP27348 245 aa6.63□□□□□ -1.35
HERC1-208ENST00000560462 PCSK1P29120 753 aa6.63□□□□□ -1.35
HERC1-208ENST00000560462 CHKAP35790 457 aa6.63□□□□□ -1.35
HERC1-208ENST00000560462 STAT1P42224 750 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms