RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 NPWQ8N729 165 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 ZNF366Q8N895 744 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 OR2AP1Q8NGE2 309 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 OR2A12Q8NGT7 310 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 PCDH19Q8TAB3 1148 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 ANKRD7Q92527 254 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 RAPGEF5Q92565 580 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 FOXJ1Q92949 421 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 GDAP1L1Q96MZ0 367 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 OSBPL1AQ9BXW6 950 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 BRD8Q9H0E9 1235 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 KDM4CQ9H3R0 1056 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 SGK2Q9HBY8 427 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 IPO11Q9UI26 975 aaKnown RBP14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 PPM1HQ9ULR3 514 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 PCDHGA5Q9Y5G8 931 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 PCDHA3Q9Y5H8 950 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 CAPN6Q9Y6Q1 641 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 R4GN57 208 aa14.24□□□□□ -0.13
PKNOX1-209ENST00000560448 NYNRINQ9P2P1 1898 aaKnown RBP14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 IGHV1OR15-9A0A0B4J2B8 117 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 C3orf70A6NLC5 250 aaPredicted RBP14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 APOL1O14791 398 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 FOXD2O60548 495 aaPredicted RBP14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 IGSF6O95976 241 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 ATP1A1P05023 1023 aaKnown RBP14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 CD48P09326 243 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 GLDCP23378 1020 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 CSNK1DP48730 415 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 TPMTP51580 245 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 NSUN2Q08J23 767 aaKnown RBP eCLIP14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 GALNT2Q10471 571 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 TAZQ16635 292 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 PMS2CLQ68D20 193 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 NCBP2-AS2Q69YL0 99 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 LPCAT2Q7L5N7 544 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 PEX26Q7Z412 305 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 UBL4BQ8N7F7 174 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 CADM4Q8NFZ8 388 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 TRIM58Q8NG06 486 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 CELF6Q96J87 481 aaKnown RBP14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 ALS2CR12Q96Q35 445 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 FAM129BQ96TA1 746 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 DUSP15Q9H1R2 295 aaPredicted RBP14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 PABPC3Q9H361 631 aaKnown RBP14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 IL36AQ9UHA7 158 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 AMACRQ9UHK6 382 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 AMFRQ9UKV5 643 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 SMG5Q9UPR3 1016 aaKnown RBP14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 MFHAS1Q9Y4C4 1052 aa14.23□□□□□ -0.13
PKNOX1-209ENST00000560448 EML5Q05BV3 1969 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 GRID2IPA4D2P6 1211 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 DFFAO00273 331 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 MAP3K13O43283 966 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 LRP3O75074 770 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 ZNF821O75541 412 aaPredicted RBP14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 PALMO75781 387 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 ZNF189O75820 626 aaPredicted RBP14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 TMCC1O94876 653 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 POP4O95707 220 aaKnown RBP14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 IL1BP01584 269 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 CHRNA3P32297 505 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 PTPN7P35236 360 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 HOXD12P35452 270 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 GARSP41250 739 aaKnown RBP14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 RWDD2BP57060 319 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 MMRN1Q13201 1228 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 PLK5Q496M5 336 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 RALGPS1Q5JS13 557 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 NT5DC3Q86UY8 548 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 CPNE8Q86YQ8 564 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 STK40Q8N2I9 435 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 SUMF1Q8NBK3 374 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 FAM131CQ96AQ9 280 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 HDAC11Q96DB2 347 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 TSGA13Q96PP4 275 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 PSKH2Q96QS6 385 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 HEPHQ9BQS7 1158 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 BTBD1Q9H0C5 482 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 WSB2Q9NYS7 404 aaPredicted RBP14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 SEPT3Q9UH03 358 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 GMEB2Q9UKD1 530 aa14.22□□□□□ -0.13
PKNOX1-209ENST00000560448 NUP205Q92621 2012 aa14.21□□□□□ -0.13
PKNOX1-209ENST00000560448 EFCAB8A8MWE9 144 aa14.21□□□□□ -0.13
PKNOX1-209ENST00000560448 K7ERQ8 282 aa14.21□□□□□ -0.13
PKNOX1-209ENST00000560448 SMAD6O43541 496 aaKnown RBP14.21□□□□□ -0.13
PKNOX1-209ENST00000560448 MAFKO60675 156 aa14.21□□□□□ -0.13
PKNOX1-209ENST00000560448 NDUFS2O75306 463 aa14.21□□□□□ -0.13
PKNOX1-209ENST00000560448 TGM2P21980 687 aa14.21□□□□□ -0.13
PKNOX1-209ENST00000560448 CCNCP24863 283 aa14.21□□□□□ -0.13
PKNOX1-209ENST00000560448 SLC8A1P32418 973 aa14.21□□□□□ -0.13
PKNOX1-209ENST00000560448 CDKN2BP42772 138 aa14.21□□□□□ -0.13
PKNOX1-209ENST00000560448 CCNHP51946 323 aaPredicted RBP14.21□□□□□ -0.13
PKNOX1-209ENST00000560448 RHOAP61586 193 aa14.21□□□□□ -0.13
PKNOX1-209ENST00000560448 HNRNPDQ14103 355 aaKnown RBP14.21□□□□□ -0.13
PKNOX1-209ENST00000560448 PDK1Q15118 436 aa14.21□□□□□ -0.13
PKNOX1-209ENST00000560448 WHAMMP3Q1A5X7 153 aa14.21□□□□□ -0.13
PKNOX1-209ENST00000560448 DPY19L3Q6ZPD9 716 aa14.21□□□□□ -0.13
PKNOX1-209ENST00000560448 PRR23BQ6ZRT6 265 aa14.21□□□□□ -0.13
PKNOX1-209ENST00000560448 RABEPKQ7Z6M1 372 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms