RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 CBFA2T2O43439 604 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 LATO43561 262 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 BUB1O43683 1085 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 PRPSAP2O60256 369 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 PRNPP04156 253 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 WNT1P04628 370 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 CYP1A2P05177 515 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 TPM3P06753 285 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 ADRB1P08588 477 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 DESP17661 470 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 RECQLP46063 649 aaPredicted RBP11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 FAM193AP78312 1265 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 SERINC3Q13530 473 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 SMTNL2Q2TAL5 461 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 HLA-BQ31612 363 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 PPP6R3Q5H9R7 873 aaPredicted RBP11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 CCDC122Q5T0U0 273 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 ATXN7L2Q5T6C5 722 aaPredicted RBP11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 TXNRD3NBQ6F5E7 133 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 VPS36Q86VN1 386 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 ZNF354CQ86Y25 554 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 UMODL1-AS1Q8N2C9 162 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 ISG20Q96AZ6 181 aaKnown RBP11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 CELF6Q96J87 481 aaKnown RBP11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 CCDC114Q96M63 670 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 DNAJC7Q99615 494 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 HEPHQ9BQS7 1158 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 NUP85Q9BW27 656 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 PACSIN1Q9BY11 444 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 ZDHHC5Q9C0B5 715 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 ZDHHC6Q9H6R6 413 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 GAREM1Q9H706 876 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 LRRC19Q9H756 370 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 CATSPERBQ9H7T0 1116 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 HECAQ9UBI9 543 aaPredicted RBP11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 HPCAL4Q9UM19 191 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 ANKRD6Q9Y2G4 727 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 MFHAS1Q9Y4C4 1052 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 FRYQ5TBA9 3013 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 EPG5Q9HCE0 2579 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 SPAARA0A1B0GVQ0 90 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 J3KR12 359 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 FGF10O15520 208 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 SH3BP5O60239 455 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 TMCC1O94876 653 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 ERCC2P18074 760 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 CSRP1P21291 193 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 GRIA4P48058 902 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 ADKP55263 362 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 YBEYP58557 167 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 RACK1P63244 317 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 TEAD4Q15561 434 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 ASTE1Q2TB18 679 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 PARP15Q460N3 678 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 PRAMEF14Q5SWL7 426 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 RFX8Q6ZV50 586 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 ERN2Q76MJ5 926 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 ARHGAP12Q8IWW6 846 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 TP53INP2Q8IXH6 220 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 RYBPQ8N488 228 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 NPWQ8N729 165 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 OR8K1Q8NGG5 319 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 KLK6Q92876 244 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 SERAC1Q96JX3 654 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 CHP1Q99653 195 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 HDAC8Q9BY41 377 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 SLC39A8Q9C0K1 460 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 KDM4CQ9H3R0 1056 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 ZWILCHQ9H900 591 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 AASDHPPTQ9NRN7 309 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 CWC15Q9P013 229 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 ANAPC7Q9UJX3 599 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 CA5BQ9Y2D0 317 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 TRPM6Q9BX84 2022 aa11.85□□□□□ -0.51
RABGGTA-216ENST00000560243 CXorf51AA0A1B0GTR3 108 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 A0A1W2PQU0 124 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 A0A1W2PR77 199 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 UPK3BL1B0FP48 263 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 UPK3BL2E5RIL1 263 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 H0Y8X5 98 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 KRIT1O00522 736 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 VILLO15195 856 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 RNGTTO60942 597 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 MFAP3LO75121 409 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 RARAP10276 462 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 CEACAM1P13688 526 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 PRLRP16471 622 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 HTR7P34969 479 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 PCK1P35558 622 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 CTSKP43235 329 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 PAPOLAP51003 745 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 NDST2P52849 883 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 GEMIN4P57678 1058 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 DPYSQ14117 519 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 CYTH1Q15438 398 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 MYLK3Q32MK0 819 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 AFMIDQ63HM1 303 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 ARHGAP36Q6ZRI8 547 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 PARS2Q7L3T8 475 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 ADAT2Q7Z6V5 191 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms