RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 GDI1P31150 447 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 MAXP61244 160 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 SLC20A2Q08357 652 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 NR1H3Q13133 447 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 PPP1R21Q6ZMI0 780 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 TMC3Q7Z5M5 1100 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 ADIPOR2Q86V24 386 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 C12orf40Q86WS4 652 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 IMP4Q96G21 291 aaKnown RBP12.38□□□□□ -0.43
HERC1-205ENST00000559886 MGME1Q9BQP7 344 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 TXLNGYQ9BZA5 131 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 POLR1EQ9GZS1 481 aaKnown RBP12.38□□□□□ -0.43
HERC1-205ENST00000559886 DNAJC17Q9NVM6 304 aaKnown RBP12.38□□□□□ -0.43
HERC1-205ENST00000559886 SLC27A6Q9Y2P4 619 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 AAR2Q9Y312 384 aaKnown RBP12.38□□□□□ -0.43
HERC1-205ENST00000559886 TICRRQ7Z2Z1 1910 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 MYO10Q9HD67 2058 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 ARNTLO00327 626 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 TRIM24O15164 1050 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 PSMD3O43242 534 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 PPFIA2O75334 1257 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 TULP3O75386 442 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 TMCC1O94876 653 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 SUN1O94901 812 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 MT-CO1P00395 513 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 LMAN1P49257 510 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 DGKGP49619 791 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 DHX9Q08211 1270 aaKnown RBP12.38□□□□□ -0.43
HERC1-205ENST00000559886 CBLBQ13191 982 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 HIF1AQ16665 826 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 CEP128Q6ZU80 1094 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 AHI1Q8N157 1196 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.38□□□□□ -0.43
HERC1-205ENST00000559886 SPATA22Q8NHS9 363 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 ARRDC2Q8TBH0 407 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 RBM15Q96T37 977 aaKnown RBP eCLIP12.38□□□□□ -0.432e-7■■■■■ 28
HERC1-205ENST00000559886 CINPQ9BW66 212 aaPredicted RBP12.38□□□□□ -0.43
HERC1-205ENST00000559886 PHACTR1Q9C0D0 580 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 GTSE1Q9NYZ3 720 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 GOLGA6CA6NDK9 693 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 GOLGA6BA6NDN3 693 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 C2CD4DB7Z1M9 353 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 MT-CYBP00156 380 aaPredicted RBP12.37□□□□□ -0.43
HERC1-205ENST00000559886 GOLGA6DP0CG33 693 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 HSPA9P38646 679 aaKnown RBP12.37□□□□□ -0.43
HERC1-205ENST00000559886 SERPINH1P50454 418 aaKnown RBP12.37□□□□□ -0.43
HERC1-205ENST00000559886 SULT2A1Q06520 285 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 ITKQ08881 620 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 NIPAL4Q0D2K0 466 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 SLMAPQ14BN4 828 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 TMEM215Q68D42 235 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 ZNF534Q76KX8 674 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 METTL3Q86U44 580 aaKnown RBP12.37□□□□□ -0.43
HERC1-205ENST00000559886 PRPF39Q86UA1 669 aaKnown RBP12.37□□□□□ -0.43
HERC1-205ENST00000559886 CAND1Q86VP6 1230 aaKnown RBP12.37□□□□□ -0.43
HERC1-205ENST00000559886 CCDC25Q86WR0 208 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 RELL1Q8IUW5 271 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 MREGQ8N565 214 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 TTC17Q96AE7 1141 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 TADA1Q96BN2 335 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 SERPINB12Q96P63 405 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 GOLGA6AQ9NYA3 693 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 UBP1Q9NZI7 540 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 HS3ST2Q9Y278 367 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 MMP2P08253 660 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 CR2P20023 1033 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 CTSOP43234 321 aaPredicted RBP12.37□□□□□ -0.43
HERC1-205ENST00000559886 GEMP55040 296 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 ARL4CP56559 192 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 SARNPP82979 210 aaKnown RBP12.37□□□□□ -0.43
HERC1-205ENST00000559886 DSC2Q02487 901 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 GEN1Q17RS7 908 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 FNBP1LQ5T0N5 605 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 PDIK1LQ8N165 341 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 WFIKKN2Q8TEU8 576 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 SEMA3CQ99985 751 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 PHF7Q9BWX1 381 aaPredicted RBP12.37□□□□□ -0.43
HERC1-205ENST00000559886 LRRC40Q9H9A6 602 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 VPS45Q9NRW7 570 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 DEC1Q9P2X7 70 aa12.37□□□□□ -0.43
HERC1-205ENST00000559886 E7ESA3 106 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 K7ERQ8 282 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 EIF3HO15372 352 aaKnown RBP eCLIP12.36□□□□□ -0.432e-7■■■■□ 19.9
HERC1-205ENST00000559886 MLNP12872 115 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 GJA4P35212 333 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 GRIA1P42261 906 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 MAGEA3P43357 314 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 TNNT3P45378 269 aaPredicted RBP12.36□□□□□ -0.43
HERC1-205ENST00000559886 SLC6A11P48066 632 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 ECT2LQ008S8 904 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 NSUN2Q08J23 767 aaKnown RBP eCLIP12.36□□□□□ -0.43
HERC1-205ENST00000559886 MPP3Q13368 585 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 IHHQ14623 411 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 SMAD2Q15796 467 aaKnown RBP12.36□□□□□ -0.43
HERC1-205ENST00000559886 ITPRIPL2Q3MIP1 535 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 LEXMQ3ZCV2 418 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 MSS51Q4VC12 460 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 MBLAC2Q68D91 279 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 CENPUQ71F23 418 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 PLCD3Q8N3E9 789 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms