RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 AFMIDQ63HM1 303 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 CES5AQ6NT32 575 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 TIFABQ6ZNK6 161 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 LINC00523Q86TU6 105 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 KLHDC8BQ8IXV7 354 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 MSLNLQ96KJ4 702 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 TRIM56Q9BRZ2 755 aaKnown RBP18.1■□□□□ 0.49
SNX1-208ENST00000559844 MLPHQ9BV36 600 aaPredicted RBP18.1■□□□□ 0.49
SNX1-208ENST00000559844 SLC39A8Q9C0K1 460 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 IQCGQ9H095 443 aaKnown RBP18.1■□□□□ 0.49
SNX1-208ENST00000559844 GRID1Q9ULK0 1009 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 VANGL2Q9ULK5 521 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 AAR2Q9Y312 384 aaKnown RBP18.1■□□□□ 0.49
SNX1-208ENST00000559844 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.1■□□□□ 0.49
SNX1-208ENST00000559844 H3BQ06 376 aaPredicted RBP18.1■□□□□ 0.49
SNX1-208ENST00000559844 MATN3O15232 486 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 CACNG3O60359 315 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 CCNB1P14635 433 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 KCNA5P22460 613 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 ADRA1DP25100 572 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 EPHA5P54756 1037 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 CRADDP78560 199 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 GAREM2Q75VX8 874 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 TMEM150AQ86TG1 271 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 DNAAF3Q8N9W5 541 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 PDZD8Q8NEN9 1154 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 ZSCAN18Q8TBC5 510 aaPredicted RBP18.1■□□□□ 0.49
SNX1-208ENST00000559844 S1PR5Q9H228 398 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 UBE2ZQ9H832 354 aaPredicted RBP18.1■□□□□ 0.49
SNX1-208ENST00000559844 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.1■□□□□ 0.49
SNX1-208ENST00000559844 PPARGC1AQ9UBK2 798 aaKnown RBP18.1■□□□□ 0.49
SNX1-208ENST00000559844 C5orf42Q9H799 3197 aa18.1■□□□□ 0.49
SNX1-208ENST00000559844 A0A1W2PRU2 124 aa18.09■□□□□ 0.49
SNX1-208ENST00000559844 EDF1O60869 148 aaKnown RBP18.09■□□□□ 0.49
SNX1-208ENST00000559844 F11P03951 625 aa18.09■□□□□ 0.49
SNX1-208ENST00000559844 DHRS4L1P0CG22 281 aa18.09■□□□□ 0.49
SNX1-208ENST00000559844 GJA1P17302 382 aa18.09■□□□□ 0.49
SNX1-208ENST00000559844 CCR2P41597 374 aa18.09■□□□□ 0.49
SNX1-208ENST00000559844 MGAT5Q09328 741 aa18.09■□□□□ 0.49
SNX1-208ENST00000559844 EFEMP1Q12805 493 aa18.09■□□□□ 0.49
SNX1-208ENST00000559844 SLC5A9Q2M3M2 681 aa18.09■□□□□ 0.49
SNX1-208ENST00000559844 CHSY1Q86X52 802 aa18.09■□□□□ 0.49
SNX1-208ENST00000559844 LEMD2Q8NC56 503 aa18.09■□□□□ 0.49
SNX1-208ENST00000559844 OVCA2Q8WZ82 227 aa18.09■□□□□ 0.49
SNX1-208ENST00000559844 ZNF75CPQ92670 426 aaPredicted RBP18.09■□□□□ 0.49
SNX1-208ENST00000559844 GCNAQ96QF7 691 aa18.09■□□□□ 0.49
SNX1-208ENST00000559844 IL12RB2Q99665 862 aa18.09■□□□□ 0.49
SNX1-208ENST00000559844 TRPM5Q9NZQ8 1165 aa18.09■□□□□ 0.49
SNX1-208ENST00000559844 SLC17A7Q9P2U7 560 aa18.09■□□□□ 0.49
SNX1-208ENST00000559844 PRKAG3Q9UGI9 489 aa18.09■□□□□ 0.49
SNX1-208ENST00000559844 PHTF1Q9UMS5 762 aa18.09■□□□□ 0.49
SNX1-208ENST00000559844 UGT1A9O60656 530 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 MAFKO60675 156 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 ANXA9O76027 345 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 FSBPO95073 299 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 RHOQP17081 205 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 CDC25CP30307 473 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 ANO4Q32M45 955 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 ATAT1Q5SQI0 421 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 ARTNQ5T4W7 220 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 PIK3R6Q5UE93 754 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 TRPM8Q7Z2W7 1104 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 C10orf67Q8IYJ2 551 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 SMRP1Q8NCR6 262 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 TCEAL4Q96EI5 215 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 BTN2A3PQ96KV6 586 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 FCRL5Q96RD9 977 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 ATXN3LQ9H3M9 355 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 UGT1A7Q9HAW7 530 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 UGT1A10Q9HAW8 530 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 UGT1A8Q9HAW9 530 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 PIH1D1Q9NWS0 290 aaKnown RBP18.08■□□□□ 0.49
SNX1-208ENST00000559844 KLHL14Q9P2G3 628 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 CD207Q9UJ71 328 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 RPS6KL1Q9Y6S9 549 aa18.08■□□□□ 0.49
SNX1-208ENST00000559844 DENND4AQ7Z401 1863 aa18.08■□□□□ 0.48
SNX1-208ENST00000559844 ZNF840PA6NDX5 716 aa18.08■□□□□ 0.48
SNX1-208ENST00000559844 NRG2O14511 850 aaPredicted RBP18.08■□□□□ 0.48
SNX1-208ENST00000559844 RFPL1O75677 317 aa18.08■□□□□ 0.48
SNX1-208ENST00000559844 USP1O94782 785 aa18.08■□□□□ 0.48
SNX1-208ENST00000559844 FGF19O95750 216 aa18.08■□□□□ 0.48
SNX1-208ENST00000559844 PPP3CCP48454 512 aa18.08■□□□□ 0.48
SNX1-208ENST00000559844 KPNA1P52294 538 aaPredicted RBP18.08■□□□□ 0.48
SNX1-208ENST00000559844 NDST2P52849 883 aa18.08■□□□□ 0.48
SNX1-208ENST00000559844 CDH17Q12864 832 aa18.08■□□□□ 0.48
SNX1-208ENST00000559844 CGB2Q6NT52 195 aa18.08■□□□□ 0.48
SNX1-208ENST00000559844 FAM47EQ6ZV65 393 aa18.08■□□□□ 0.48
SNX1-208ENST00000559844 C14orf80Q86SX3 495 aa18.08■□□□□ 0.48
SNX1-208ENST00000559844 RASSF3Q86WH2 238 aa18.08■□□□□ 0.48
SNX1-208ENST00000559844 MAFAQ8NHW3 353 aaPredicted RBP18.08■□□□□ 0.48
SNX1-208ENST00000559844 HLA-CQ95604 372 aa18.08■□□□□ 0.48
SNX1-208ENST00000559844 CERS2Q96G23 380 aa18.08■□□□□ 0.48
SNX1-208ENST00000559844 SRPK1Q96SB4 655 aaKnown RBP18.08■□□□□ 0.48
SNX1-208ENST00000559844 ZYG11BQ9C0D3 744 aa18.08■□□□□ 0.48
SNX1-208ENST00000559844 IL22Q9GZX6 179 aa18.08■□□□□ 0.48
SNX1-208ENST00000559844 MARCH2Q9P0N8 246 aa18.08■□□□□ 0.48
SNX1-208ENST00000559844 ZDHHC11BP0C7U3 371 aa18.07■□□□□ 0.48
SNX1-208ENST00000559844 ETV4P43268 484 aa18.07■□□□□ 0.48
SNX1-208ENST00000559844 GEMP55040 296 aa18.07■□□□□ 0.48
SNX1-208ENST00000559844 CYP4F8P98187 520 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms