RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 PTCD2Q8WV60 388 aaKnown RBP12.88□□□□□ -0.35
USP3-213ENST00000559711 MTBPQ96DY7 904 aa12.88□□□□□ -0.35
USP3-213ENST00000559711 CERS2Q96G23 380 aa12.88□□□□□ -0.35
USP3-213ENST00000559711 ZNF317Q96PQ6 595 aaPredicted RBP12.88□□□□□ -0.35
USP3-213ENST00000559711 SLC46A2Q9BY10 475 aa12.88□□□□□ -0.35
USP3-213ENST00000559711 POLR1EQ9GZS1 481 aaKnown RBP12.88□□□□□ -0.35
USP3-213ENST00000559711 UGT1A7Q9HAW7 530 aa12.88□□□□□ -0.35
USP3-213ENST00000559711 UGT1A10Q9HAW8 530 aa12.88□□□□□ -0.35
USP3-213ENST00000559711 UGT1A8Q9HAW9 530 aa12.88□□□□□ -0.35
USP3-213ENST00000559711 CHRAC1Q9NRG0 131 aa12.88□□□□□ -0.35
USP3-213ENST00000559711 LSM7Q9UK45 103 aaKnown RBP12.88□□□□□ -0.35
USP3-213ENST00000559711 SPAG7O75391 227 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 CKMP06732 381 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 MYL4P12829 197 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 PTPN2P17706 415 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 IRS1P35568 1242 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 CCR2P41597 374 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 CD86P42081 329 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 OXCT1P55809 520 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 DSC2Q02487 901 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 ITKQ08881 620 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 PDE12Q6L8Q7 609 aaKnown RBP12.87□□□□□ -0.35
USP3-213ENST00000559711 PKN3Q6P5Z2 889 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 TIFABQ6ZNK6 161 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 CPXM2Q8N436 756 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 ANKRD42Q8N9B4 389 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 BANPQ8N9N5 519 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 ZNF669Q96BR6 464 aaPredicted RBP12.87□□□□□ -0.35
USP3-213ENST00000559711 MFSD3Q96ES6 412 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 TMA16Q96EY4 203 aaKnown RBP12.87□□□□□ -0.35
USP3-213ENST00000559711 SERAC1Q96JX3 654 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 SAMD11Q96NU1 681 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 PSKH2Q96QS6 385 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 CCT8L2Q96SF2 557 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 SPON2Q9BUD6 331 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 FSD1LQ9BXM9 530 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 MRM3Q9HC36 420 aaKnown RBP12.87□□□□□ -0.35
USP3-213ENST00000559711 MAN1C1Q9NR34 630 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 SEPT3Q9UH03 358 aa12.87□□□□□ -0.35
USP3-213ENST00000559711 NYNRINQ9P2P1 1898 aaKnown RBP12.87□□□□□ -0.35
USP3-213ENST00000559711 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.86□□□□□ -0.35
USP3-213ENST00000559711 HMX2A2RU54 273 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 SOBPA7XYQ1 873 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 TRIM49D1C9J1S8 452 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 MUSKO15146 869 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 TBL1XO60907 577 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 CLASP2O75122 1294 aaKnown RBP12.86□□□□□ -0.35
USP3-213ENST00000559711 RFPL2O75678 378 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 ASMTLO95671 621 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 FAM107AO95990 144 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 HNRNPA1P09651 372 aaKnown RBP eCLIP12.86□□□□□ -0.35
USP3-213ENST00000559711 GJA1P17302 382 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 DDX6P26196 483 aaKnown RBP eCLIP12.86□□□□□ -0.35
USP3-213ENST00000559711 GBP2P32456 591 aaPredicted RBP12.86□□□□□ -0.35
USP3-213ENST00000559711 WDR4P57081 412 aaKnown RBP12.86□□□□□ -0.35
USP3-213ENST00000559711 DNAJC3Q13217 504 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 ZNF235Q14590 738 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 SLC14A2Q15849 920 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 C9orf50Q5SZB4 431 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 STXBP5Q5T5C0 1151 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 RNF219Q5W0B1 726 aaPredicted RBP12.86□□□□□ -0.35
USP3-213ENST00000559711 BBS5Q8N3I7 341 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 SHKBP1Q8TBC3 707 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 MGARPQ8TDB4 240 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 CKAP2Q8WWK9 683 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 CHMP6Q96FZ7 201 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 MGME1Q9BQP7 344 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 HAUS2Q9NVX0 235 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 HCFC1R1Q9NWW0 138 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 CFAP97Q9P2B7 532 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 UBA2Q9UBT2 640 aaPredicted RBP12.86□□□□□ -0.35
USP3-213ENST00000559711 ARHGAP26Q9UNA1 814 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 PLXNA4Q9HCM2 1894 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 LOC285095A0A1B0GVY8 99 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 TYW5A2RUC4 315 aaKnown RBP12.86□□□□□ -0.35
USP3-213ENST00000559711 GRXCR1A8MXD5 290 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 MOSPD3O75425 235 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 RFPL1O75677 317 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 CSPG5O95196 566 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 ZWINTO95229 277 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 LUC7L3O95232 432 aaKnown RBP12.86□□□□□ -0.35
USP3-213ENST00000559711 EPOP01588 193 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 POU2F2P09086 479 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 ERVK-10P10266 1014 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 CA4P22748 312 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 ADRA1DP25100 572 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 RPA3P35244 121 aaPredicted RBP12.86□□□□□ -0.35
USP3-213ENST00000559711 ERVK-21P61565 698 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 MSLNQ13421 630 aaPredicted RBP12.86□□□□□ -0.35
USP3-213ENST00000559711 LRRC14Q15048 493 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 ZSCAN26Q16670 478 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 MPP7Q5T2T1 576 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 RNF43Q68DV7 783 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 FAM109BQ6ICB4 259 aaPredicted RBP12.86□□□□□ -0.35
USP3-213ENST00000559711 PACS1Q6VY07 963 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 LEMD2Q8NC56 503 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 TGS1Q96RS0 853 aaKnown RBP12.86□□□□□ -0.35
USP3-213ENST00000559711 SEMA3CQ99985 751 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 ZFATQ9P243 1243 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 DNMT3BQ9UBC3 853 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms