RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 CLEC17AQ6ZS10 378 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 ABI3BPQ7Z7G0 1075 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 NLRP14Q86W24 1093 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 OR13H1Q8NG92 308 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 JOSD2Q8TAC2 188 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 FAM174AQ8TBP5 190 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 GPT2Q8TD30 523 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 HNRNPLLQ8WVV9 542 aaKnown RBP15.22■□□□□ 0.03
LRRC28-213ENST00000559399 ISG20Q96AZ6 181 aaKnown RBP15.22■□□□□ 0.03
LRRC28-213ENST00000559399 TM6SF2Q9BZW4 377 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 RAB6CQ9H0N0 254 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 OSBPL2Q9H1P3 480 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 ZDHHC6Q9H6R6 413 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 ZFYVE26Q68DK2 2539 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 PLXNA2O75051 1894 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 COL5A1P20908 1838 aaPredicted RBP15.22■□□□□ 0.03
LRRC28-213ENST00000559399 A0A087WV48 116 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 TRIM38O00635 465 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 LRIG2O94898 1065 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 GJB6O95452 261 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 KRT3P12035 628 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 UNGP13051 313 aaPredicted RBP15.21■□□□□ 0.03
LRRC28-213ENST00000559399 DGKAP23743 735 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 L1CAMP32004 1257 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 KYAT3Q6YP21 454 aaKnown RBP15.21■□□□□ 0.03
LRRC28-213ENST00000559399 PARS2Q7L3T8 475 aaKnown RBP15.21■□□□□ 0.03
LRRC28-213ENST00000559399 ZSCAN30Q86W11 494 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 PLPP6Q8IY26 295 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 SLC25A45Q8N413 288 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 RYBPQ8N488 228 aaPredicted RBP15.21■□□□□ 0.03
LRRC28-213ENST00000559399 ANKRD20A12PQ8NF67 263 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 OR4C6Q8NH72 309 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 FAM172AQ8WUF8 416 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 ARHGEF2Q92974 986 aaKnown RBP15.21■□□□□ 0.03
LRRC28-213ENST00000559399 TBC1D31Q96DN5 1066 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 PCMTD1Q96MG8 357 aaPredicted RBP15.21■□□□□ 0.03
LRRC28-213ENST00000559399 LMBRD1Q9NUN5 540 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 NDFIP2Q9NV92 336 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 FANCLQ9NW38 375 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 TMEM248Q9NWD8 314 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 UCKL1Q9NWZ5 548 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 HECAQ9UBI9 543 aaPredicted RBP15.21■□□□□ 0.03
LRRC28-213ENST00000559399 DNAI1Q9UI46 699 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 HPCAL4Q9UM19 191 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 NEU3Q9UQ49 428 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 SIK3Q9Y2K2 1263 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 FADS3Q9Y5Q0 445 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 ACTL7AQ9Y615 435 aa15.21■□□□□ 0.03
LRRC28-213ENST00000559399 FAM72CH0Y354 149 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 FFAR2O15552 330 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 AP1G1O43747 822 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 RAMP2O60895 175 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 CD160O95971 181 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 PLEKP08567 350 aaPredicted RBP15.2■□□□□ 0.02
LRRC28-213ENST00000559399 HDAC4P56524 1084 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 GSCP56915 257 aaPredicted RBP15.2■□□□□ 0.02
LRRC28-213ENST00000559399 DAB2P98082 770 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 PTP4A2Q12974 167 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 POLD3Q15054 466 aaPredicted RBP15.2■□□□□ 0.02
LRRC28-213ENST00000559399 SYCP1Q15431 976 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 FAM72AQ5TYM5 149 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 FAM72DQ6L9T8 149 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 RBM43Q6ZSC3 357 aaKnown RBP15.2■□□□□ 0.02
LRRC28-213ENST00000559399 Q6ZSR6 202 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 PTAR1Q7Z6K3 402 aaPredicted RBP15.2■□□□□ 0.02
LRRC28-213ENST00000559399 FAM72BQ86X60 149 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 DCP2Q8IU60 420 aaKnown RBP15.2■□□□□ 0.02
LRRC28-213ENST00000559399 SLC22A18ASQ8N1D0 253 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 CCDC185Q8N715 623 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 OR6K2Q8NGY2 324 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 RFFLQ8WZ73 363 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 CENPIQ92674 756 aaPredicted RBP15.2■□□□□ 0.02
LRRC28-213ENST00000559399 NTAN1Q96AB6 310 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 IFT43Q96FT9 208 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 LRIG1Q96JA1 1093 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 FEM1CQ96JP0 617 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 PCDHB18PQ96TA0 734 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 SELENOOQ9BVL4 669 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 SLC17A9Q9BYT1 436 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 MAGEH1Q9H213 219 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 ADAM22Q9P0K1 906 aa15.2■□□□□ 0.02
LRRC28-213ENST00000559399 LGALS16A8MUM7 142 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 PIAS2O75928 621 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 GSRP00390 522 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 CALB1P05937 261 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 ALPPL2P10696 532 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 GPD1P21695 349 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 RFC1P35251 1148 aaPredicted RBP15.19■□□□□ 0.02
LRRC28-213ENST00000559399 COPB1P53618 953 aaKnown RBP15.19■□□□□ 0.02
LRRC28-213ENST00000559399 SNRPD1P62314 119 aaKnown RBP15.19■□□□□ 0.02
LRRC28-213ENST00000559399 INSM1Q01101 510 aaPredicted RBP15.19■□□□□ 0.02
LRRC28-213ENST00000559399 FGL2Q14314 439 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 CLEC16AQ2KHT3 1053 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 PHF13Q86YI8 300 aaPredicted RBP15.19■□□□□ 0.02
LRRC28-213ENST00000559399 C3orf20Q8ND61 904 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 NEK11Q8NG66 645 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 OR2AP1Q8NGE2 309 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 RAB7BQ96AH8 199 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 DCBLD2Q96PD2 775 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 OSBPL1AQ9BXW6 950 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms