RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 SIPA1Q96FS4 1042 aa17.2■□□□□ 0.34
PSEN1-224ENST00000559361 RBM41Q96IZ5 413 aaKnown RBP17.2■□□□□ 0.34
PSEN1-224ENST00000559361 RPRD1AQ96P16 312 aaPredicted RBP17.2■□□□□ 0.34
PSEN1-224ENST00000559361 ZNF670Q9BS34 389 aa17.2■□□□□ 0.34
PSEN1-224ENST00000559361 SIK2Q9H0K1 926 aa17.2■□□□□ 0.34
PSEN1-224ENST00000559361 PCED1AQ9H1Q7 454 aa17.2■□□□□ 0.34
PSEN1-224ENST00000559361 DHX35Q9H5Z1 703 aaKnown RBP17.2■□□□□ 0.34
PSEN1-224ENST00000559361 PLK2Q9NYY3 685 aa17.2■□□□□ 0.34
PSEN1-224ENST00000559361 XPO7Q9UIA9 1087 aaKnown RBP17.2■□□□□ 0.34
PSEN1-224ENST00000559361 JRKLQ9Y4A0 524 aa17.2■□□□□ 0.34
PSEN1-224ENST00000559361 ARID1BQ8NFD5 2236 aaPredicted RBP17.19■□□□□ 0.34
PSEN1-224ENST00000559361 A0A1B0GVM2 712 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 A0A1B0GVT2 93 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 TCAF2A6NFQ2 919 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 DRGXA6NNA5 263 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 E9PAM4 449 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 H3BRJ5 948 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 TK2O00142 265 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 TNFSF14O43557 240 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 CLDN11O75508 207 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 CETN2P41208 172 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 OXCT1P55809 520 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 COPS2P61201 443 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 KRT81Q14533 505 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 SUZ12Q15022 739 aaKnown RBP17.19■□□□□ 0.34
PSEN1-224ENST00000559361 GEN1Q17RS7 908 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 SMTNL2Q2TAL5 461 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 KCNT1Q5JUK3 1230 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 ZFYVE27Q5T4F4 411 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 FBXL22Q6P050 247 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 CHST9Q7L1S5 443 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 CCDC117Q8IWD4 279 aaPredicted RBP17.19■□□□□ 0.34
PSEN1-224ENST00000559361 LGI2Q8N0V4 545 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 KCTD6Q8NC69 237 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 HSPH1Q92598 858 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 TBC1D31Q96DN5 1066 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 HES6Q96HZ4 224 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 UBL7Q96S82 380 aaPredicted RBP17.19■□□□□ 0.34
PSEN1-224ENST00000559361 SLC2A11Q9BYW1 496 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 ZYG11BQ9C0D3 744 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 CATSPERBQ9H7T0 1116 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 STIM2Q9P246 746 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 VANGL2Q9ULK5 521 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 SLCO1B1Q9Y6L6 691 aa17.19■□□□□ 0.34
PSEN1-224ENST00000559361 MGAQ8IWI9 3026 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 USP27XA6NNY8 438 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 EEF2KO00418 725 aaKnown RBP17.18■□□□□ 0.34
PSEN1-224ENST00000559361 C1QL1O75973 258 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 LRIG2O94898 1065 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 ZRANB2O95218 330 aaKnown RBP eCLIP17.18■□□□□ 0.34
PSEN1-224ENST00000559361 FTCDO95954 541 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 TUBB4AP04350 444 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 TCF4P15884 667 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 SLC6A4P31645 630 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 CSNK1EP49674 416 aaKnown RBP17.18■□□□□ 0.34
PSEN1-224ENST00000559361 CDH4P55283 916 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 CDH6P55285 790 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 RWDD2BP57060 319 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 TPI1P60174 286 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 C19orf57Q0VDD7 668 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 KIF19Q2TAC6 998 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 MEI1Q5TIA1 1274 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 FYB2Q5VWT5 728 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 ZNF683Q8IZ20 524 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 RCOR2Q8IZ40 523 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 EXD1Q8NHP7 514 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 DDI1Q8WTU0 396 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 PRCCQ92733 491 aaPredicted RBP17.18■□□□□ 0.34
PSEN1-224ENST00000559361 BHMTQ93088 406 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 GOLPH3Q9H4A6 298 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 HYOU1Q9Y4L1 999 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 COL6A6A6NMZ7 2263 aa17.18■□□□□ 0.34
PSEN1-224ENST00000559361 FAM149AA5PLN7 773 aa17.17■□□□□ 0.34
PSEN1-224ENST00000559361 PCDHGA12O60330 932 aa17.17■□□□□ 0.34
PSEN1-224ENST00000559361 KRT1P04264 644 aa17.17■□□□□ 0.34
PSEN1-224ENST00000559361 RHOQP17081 205 aa17.17■□□□□ 0.34
PSEN1-224ENST00000559361 ARSEP51690 589 aa17.17■□□□□ 0.34
PSEN1-224ENST00000559361 AFF3P51826 1226 aaKnown RBP17.17■□□□□ 0.34
PSEN1-224ENST00000559361 RPS6KA1Q15418 735 aa17.17■□□□□ 0.34
PSEN1-224ENST00000559361 PPP6R3Q5H9R7 873 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-224ENST00000559361 ZNF569Q5MCW4 686 aa17.17■□□□□ 0.34
PSEN1-224ENST00000559361 TXNRD3NBQ6F5E7 133 aa17.17■□□□□ 0.34
PSEN1-224ENST00000559361 TENM4Q6N022 2769 aa17.17■□□□□ 0.34
PSEN1-224ENST00000559361 RFWD3Q6PCD5 774 aa17.17■□□□□ 0.34
PSEN1-224ENST00000559361 ZSCAN30Q86W11 494 aa17.17■□□□□ 0.34
PSEN1-224ENST00000559361 PRICKLE1Q96MT3 831 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-224ENST00000559361 KCTD15Q96SI1 283 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-224ENST00000559361 PCDH18Q9HCL0 1135 aa17.17■□□□□ 0.34
PSEN1-224ENST00000559361 TMPRSS4Q9NRS4 437 aa17.17■□□□□ 0.34
PSEN1-224ENST00000559361 SNX11Q9Y5W9 270 aa17.17■□□□□ 0.34
PSEN1-224ENST00000559361 GOLGA6L7A0A1B0GV03 622 aa17.16■□□□□ 0.34
PSEN1-224ENST00000559361 LRRD1A4D1F6 860 aa17.16■□□□□ 0.34
PSEN1-224ENST00000559361 WASH4PA8MWX3 477 aa17.16■□□□□ 0.34
PSEN1-224ENST00000559361 DAPK3O43293 454 aa17.16■□□□□ 0.34
PSEN1-224ENST00000559361 CREB3O43889 395 aa17.16■□□□□ 0.34
PSEN1-224ENST00000559361 SYNCRIPO60506 623 aaKnown RBP17.16■□□□□ 0.34
PSEN1-224ENST00000559361 SRGAP2O75044 1071 aa17.16■□□□□ 0.34
PSEN1-224ENST00000559361 PRB1P04280 392 aa17.16■□□□□ 0.34
PSEN1-224ENST00000559361 KDELR1P24390 212 aa17.16■□□□□ 0.34
PSEN1-224ENST00000559361 EPHB2P29323 1055 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms