RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 TSPAN16Q9UKR8 245 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 PLA2G2DQ9UNK4 145 aa7.65□□□□□ -1.18
SPG11-213ENST00000558988 SSU72P8A0A1W2PR75 194 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 M0QYV0 167 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 AP5Z1O43299 807 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 NDUFS2O75306 463 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 CYBBP04839 570 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 FMO5P49326 533 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 ATXN3P54252 364 aaPredicted RBP7.64□□□□□ -1.19
SPG11-213ENST00000558988 PCBP3P57721 371 aaKnown RBP7.64□□□□□ -1.19
SPG11-213ENST00000558988 COG7P83436 770 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 ARID5AQ03989 594 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 LRRC63Q05C16 580 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 BST2Q10589 180 aaKnown RBP7.64□□□□□ -1.19
SPG11-213ENST00000558988 BYSLQ13895 437 aaKnown RBP7.64□□□□□ -1.19
SPG11-213ENST00000558988 STARD3Q14849 445 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 DAB2IPQ5VWQ8 1189 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 ARHGAP17Q68EM7 881 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 RRAGAQ7L523 313 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 FMNL3Q8IVF7 1028 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 ARHGAP18Q8N392 663 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 TTC39CQ8N584 583 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 ANKRD52Q8NB46 1076 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 ENGASEQ8NFI3 743 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 OR2I1PQ8NGU4 316 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 IPO4Q8TEX9 1081 aaKnown RBP7.64□□□□□ -1.19
SPG11-213ENST00000558988 SLC35C1Q96A29 364 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 P2RY11Q96G91 374 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 TCTN2Q96GX1 697 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 NT5C1BQ96P26 610 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 CDK5RAP1Q96SZ6 601 aaKnown RBP7.64□□□□□ -1.19
SPG11-213ENST00000558988 SSBP3Q9BWW4 388 aaPredicted RBP7.64□□□□□ -1.19
SPG11-213ENST00000558988 ASPNQ9BXN1 380 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 NUSAP1Q9BXS6 441 aaKnown RBP7.64□□□□□ -1.19
SPG11-213ENST00000558988 TMEM74BQ9NUR3 256 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 AGO1Q9UL18 857 aaKnown RBP7.64□□□□□ -1.19
SPG11-213ENST00000558988 GPR55Q9Y2T6 319 aaPredicted RBP7.64□□□□□ -1.19
SPG11-213ENST00000558988 STON1Q9Y6Q2 735 aa7.64□□□□□ -1.19
SPG11-213ENST00000558988 CACNA1AO00555 2505 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 ADAMTS9Q9P2N4 1935 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 A0A1W2PQF6 199 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 FAM170AA1A519 330 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 YJEFN3A6XGL0 299 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 MEI4A8MW99 385 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 E7ENQ6 273 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 O00370 1275 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 XPO1O14980 1071 aaKnown RBP7.63□□□□□ -1.19
SPG11-213ENST00000558988 SYNCRIPO60506 623 aaKnown RBP7.63□□□□□ -1.19
SPG11-213ENST00000558988 KCNK5O95279 499 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 CISD3P0C7P0 127 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 VDRP11473 427 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 KRT5P13647 590 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 HLA-EP13747 358 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 TBXAS1P24557 533 aaPredicted RBP7.63□□□□□ -1.19
SPG11-213ENST00000558988 CHKAP35790 457 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 USP8P40818 1118 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 HARS2P49590 506 aaKnown RBP7.63□□□□□ -1.19
SPG11-213ENST00000558988 LIMK1P53667 647 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 MFAP3P55082 362 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 ZNF33AQ06730 810 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 ENPEPQ07075 957 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 GEN1Q17RS7 908 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 BBS9Q3SYG4 887 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 BSPRYQ5W0U4 402 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 KLHDC10Q6PID8 442 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 FAM124AQ86V42 546 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 SYT12Q8IV01 421 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 ARHGEF19Q8IW93 802 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 ZNF366Q8N895 744 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 TRIML1Q8N9V2 468 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 RBBP8NLQ8NC74 664 aaPredicted RBP7.63□□□□□ -1.19
SPG11-213ENST00000558988 FAM13CQ8NE31 585 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 DEFB124Q8NES8 71 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 NUP43Q8NFH3 380 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 OLIG1Q8TAK6 271 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 CLEC4CQ8WTT0 213 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 UCMAQ8WVF2 138 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 TFAP2BQ92481 460 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 SNX19Q92543 992 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 DHTKD1Q96HY7 919 aaPredicted RBP7.63□□□□□ -1.19
SPG11-213ENST00000558988 DUSP9Q99956 384 aaKnown RBP7.63□□□□□ -1.19
SPG11-213ENST00000558988 LSM14BQ9BX40 385 aaKnown RBP7.63□□□□□ -1.19
SPG11-213ENST00000558988 DCLK3Q9C098 648 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 MIS12Q9H081 205 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 MIR1-1HGQ9H1L0 117 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 METTL14Q9HCE5 456 aaKnown RBP7.63□□□□□ -1.19
SPG11-213ENST00000558988 ST7Q9NRC1 585 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 CLIC5Q9NZA1 410 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 CLEC4EQ9ULY5 219 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 ZNF510Q9Y2H8 683 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 TNFRSF18Q9Y5U5 241 aa7.63□□□□□ -1.19
SPG11-213ENST00000558988 CNOT1A5YKK6 2376 aaKnown RBP7.63□□□□□ -1.19
SPG11-213ENST00000558988 CEP192Q8TEP8 1941 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 IGHV1OR15-9A0A0B4J2B8 117 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 GOLGA6L7A0A1B0GV03 622 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 KRT37O76014 449 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 PENKP01210 267 aaPredicted RBP7.62□□□□□ -1.19
SPG11-213ENST00000558988 EPHX1P07099 455 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 ENGP17813 658 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 PRKCHP24723 683 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms