RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 PRNPP04156 253 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 ATXN1LP0C7T5 689 aaKnown RBP12.75□□□□□ -0.37
SMAD3-208ENST00000558827 C1QTNF9P0C862 333 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 IGF2RP11717 2491 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 ITIH2P19823 946 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 L1CAMP32004 1257 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 MAPKAPK2P49137 400 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 CLDN2P57739 230 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 BNIP3Q12983 259 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 SLC14A1Q13336 389 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 MAPK8IP2Q13387 824 aaPredicted RBP12.75□□□□□ -0.37
SMAD3-208ENST00000558827 NFKBIBQ15653 356 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 ACBD5Q5T8D3 534 aaPredicted RBP12.75□□□□□ -0.37
SMAD3-208ENST00000558827 SEL1L3Q68CR1 1132 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 PLEKHA7Q6IQ23 1121 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 ZNF783Q6ZMS7 281 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 KDM7AQ6ZMT4 941 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 ERN2Q76MJ5 926 aaKnown RBP12.75□□□□□ -0.37
SMAD3-208ENST00000558827 TMIEQ8NEW7 156 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 BTBD6Q96KE9 485 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 KCTD15Q96SI1 283 aaPredicted RBP12.75□□□□□ -0.37
SMAD3-208ENST00000558827 OSGEPQ9NPF4 335 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 TMEM51Q9NW97 253 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 PCOLCE2Q9UKZ9 415 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 HPCAL4Q9UM19 191 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 AP4E1Q9UPM8 1137 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 ZFR2Q9UPR6 939 aaKnown RBP12.75□□□□□ -0.37
SMAD3-208ENST00000558827 FRYQ5TBA9 3013 aa12.75□□□□□ -0.37
SMAD3-208ENST00000558827 TRPM6Q9BX84 2022 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 TMEM191CA6NGB0 347 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 RASA4BC9J798 803 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 TLR4O00206 839 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 INSIG1O15503 277 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 RASA4O43374 803 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 KDELR3O43731 214 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 UGT2B4P06133 528 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 FTH1P19P0C7X4 201 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 MIPP30301 263 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 ETFBP38117 255 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 PBX1P40424 430 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 PRKCIP41743 596 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 CCT8P50990 548 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 CLCN6P51797 869 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 TPI1P60174 286 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 SLC20A2Q08357 652 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 SCAPQ12770 1279 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 STAT4Q14765 748 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 SHBQ15464 509 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 ZNF423Q2M1K9 1284 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 PPP6R3Q5H9R7 873 aaPredicted RBP12.74□□□□□ -0.37
SMAD3-208ENST00000558827 PARS2Q7L3T8 475 aaKnown RBP12.74□□□□□ -0.37
SMAD3-208ENST00000558827 SPATS2Q86XZ4 545 aaKnown RBP12.74□□□□□ -0.37
SMAD3-208ENST00000558827 PCDH20Q8N6Y1 951 aaKnown RBP12.74□□□□□ -0.37
SMAD3-208ENST00000558827 RTL3Q8N8U3 475 aaKnown RBP12.74□□□□□ -0.37
SMAD3-208ENST00000558827 EXOC2Q96KP1 924 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 EPAS1Q99814 870 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 SNRNP25Q9BV90 132 aaKnown RBP12.74□□□□□ -0.37
SMAD3-208ENST00000558827 MAGEH1Q9H213 219 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 GGT7Q9UJ14 662 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 WASF3Q9UPY6 502 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 ITM2BQ9Y287 266 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 MFHAS1Q9Y4C4 1052 aa12.74□□□□□ -0.37
SMAD3-208ENST00000558827 CHD5Q8TDI0 1954 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 C10orf142B7Z368 130 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 J3KR12 359 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 EEF2KO00418 725 aaKnown RBP12.73□□□□□ -0.37
SMAD3-208ENST00000558827 SLC7A4O43246 635 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 DAPK3O43293 454 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 LATO43561 262 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 SDC3O75056 442 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 CBFA2T3O75081 653 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 TMCC1O94876 653 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 TCF4P15884 667 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 SEMG2Q02383 582 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 SUZ12Q15022 739 aaKnown RBP12.73□□□□□ -0.37
SMAD3-208ENST00000558827 ST3GAL2Q16842 350 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 ZNF284Q2VY69 593 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 MYLK3Q32MK0 819 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 HGSNATQ68CP4 663 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 NAPEPLDQ6IQ20 393 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 FBXL19Q6PCT2 694 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 HORMAD1Q86X24 394 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 TP53INP2Q8IXH6 220 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 RNF214Q8ND24 703 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 FAM131CQ96AQ9 280 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 VCPIP1Q96JH7 1222 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 KLHL32Q96NJ5 620 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 ELF4Q99607 663 aaPredicted RBP12.73□□□□□ -0.37
SMAD3-208ENST00000558827 EDEM3Q9BZQ6 932 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 XPO4Q9C0E2 1151 aaKnown RBP12.73□□□□□ -0.37
SMAD3-208ENST00000558827 CEP44Q9C0F1 390 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 CATSPERBQ9H7T0 1116 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 ZWILCHQ9H900 591 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 GDF3Q9NR23 364 aa12.73□□□□□ -0.37
SMAD3-208ENST00000558827 A0A1B0GTQ1 180 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 C16orf96A6NNT2 1141 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 NEMP1O14524 444 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 PRPSAP2O60256 369 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 KRT37O76014 449 aa12.72□□□□□ -0.37
SMAD3-208ENST00000558827 RNF8O76064 485 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms