RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 GJA1P17302 382 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 POU1F1P28069 291 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 EPHA8P29322 1005 aaPredicted RBP1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 PPARGP37231 505 aaPredicted RBP1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 PRCPP42785 496 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 CLCNKBP51801 687 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 TERF1P54274 439 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 TAS2R50P59544 299 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 MC1RQ01726 317 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 BFSP1Q12934 665 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 NAB2Q15742 525 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 CCDC6Q16204 474 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 C9orf152Q5JTZ5 239 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 AKNAD1Q5T1N1 836 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 DAB2IPQ5VWQ8 1189 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 FAM109BQ6ICB4 259 aaPredicted RBP1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 LRIG3Q6UXM1 1119 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 ADCK2Q7Z695 626 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 TMEM200AQ86VY9 491 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 KLBQ86Z14 1044 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 RHPN2Q8IUC4 686 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 UNC45BQ8IWX7 931 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 C11orf44Q8N8P7 122 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 LINC00476Q8WZB0 136 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 ATP6V1E2Q96A05 226 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 RNF183Q96D59 192 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 R3HDM4Q96D70 268 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 EDC3Q96F86 508 aaKnown RBP1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 LRIG1Q96JA1 1093 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 SH2D3AQ9BRG2 576 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 KLC2Q9H0B6 622 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 SLC22A11Q9NSA0 550 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 SPATS2LQ9NUQ6 558 aaKnown RBP1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 LPAR3Q9UBY5 353 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 NENFQ9UMX5 172 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 FRMD4BQ9Y2L6 1034 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 INSL6Q9Y581 213 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 PCDHA10Q9Y5I2 948 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 HEMK1Q9Y5R4 338 aaPredicted RBP1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 KCNE2Q9Y6J6 123 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 RSF1Q96T23 1441 aaPredicted RBP1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 COL7A1Q02388 2944 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 ARHGEF28Q8N1W1 1705 aaKnown RBP1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 CFAP43Q8NDM7 1665 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 WDR27A2RRH5 827 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 PTGES3LE9PB15 166 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 TSPAN1O60635 241 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 CSF1RP07333 972 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 CSF1P09603 554 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 CSH1P0DML2 217 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 CSH2P0DML3 217 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 ZNF23P17027 643 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 KRT4P19013 534 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 CHRM3P20309 590 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 CAPZA2P47755 286 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 FASLGP48023 281 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 VPS41P49754 854 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 LIG4P49917 911 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 PNLIPRP1P54315 467 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 EFNB1P98172 346 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 CREB5Q02930 508 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 GRIK2Q13002 908 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 VEPH1Q14D04 833 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 C5orf22Q49AR2 442 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 GXYLT1Q4G148 440 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 RAB41Q5JT25 222 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 CCDC30Q5VVM6 783 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 KRT79Q5XKE5 535 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 DHRS7BQ6IAN0 325 aaPredicted RBP1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 CACNA2D4Q7Z3S7 1137 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 MAVSQ7Z434 540 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 GALNT5Q7Z7M9 940 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 PALB2Q86YC2 1186 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 SCN4BQ8IWT1 228 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 CPXM2Q8N436 756 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 AVL9Q8NBF6 648 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 DNAAF1Q8NEP3 725 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 METTL6Q8TCB7 284 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 PIGOQ8TEQ8 1089 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 HDAC7Q8WUI4 952 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 EIF2AK1Q9BQI3 630 aaKnown RBP1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 TRMOQ9BU70 441 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 C1QTNF3Q9BXJ4 246 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 TRIM31Q9BZY9 425 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 TMEM39BQ9GZU3 492 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 STN1Q9H668 368 aaKnown RBP1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 DENND2DQ9H6A0 471 aaPredicted RBP1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 PLEKHA2Q9HB19 425 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 SMYD2Q9NRG4 433 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 ABHD10Q9NUJ1 306 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 PKP3Q9Y446 797 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 GLOD5A6NK44 160 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 C1QTNF3-AMACRE9PGA6 284 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 STX16-NPEPL1H3BU86 382 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 STX16O14662 325 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 FOXS1O43638 330 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 ZC3H11AO75152 810 aaKnown RBP eCLIP1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 PTP4A3O75365 173 aa1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 MT-CYBP00156 380 aaPredicted RBP1.42□□□□□ -2.18
CTDSPL2-202ENST00000558373 TFP02787 698 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms