RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 RAB3IPQ96QF0 476 aaPredicted RBP10.71□□□□□ -0.69
TPM1-210ENST00000558264 SORT1Q99523 831 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 NDNQ99608 321 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 KIFC1Q9BW19 673 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 CADM1Q9BY67 442 aaKnown RBP10.71□□□□□ -0.69
TPM1-210ENST00000558264 UNC93B1Q9H1C4 597 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 TASP1Q9H6P5 420 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 KCNK4Q9NYG8 393 aa10.71□□□□□ -0.69
TPM1-210ENST00000558264 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.71□□□□□ -0.7
TPM1-210ENST00000558264 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.71□□□□□ -0.7
TPM1-210ENST00000558264 CACNG3O60359 315 aa10.71□□□□□ -0.7
TPM1-210ENST00000558264 ENTPD5O75356 428 aa10.71□□□□□ -0.7
TPM1-210ENST00000558264 ATP5HO75947 161 aa10.71□□□□□ -0.7
TPM1-210ENST00000558264 PEX11BO96011 259 aa10.71□□□□□ -0.7
TPM1-210ENST00000558264 ATF6P18850 670 aa10.71□□□□□ -0.7
TPM1-210ENST00000558264 PTPN4P29074 926 aa10.71□□□□□ -0.7
TPM1-210ENST00000558264 SLC1A2P43004 574 aa10.71□□□□□ -0.7
TPM1-210ENST00000558264 GEMP55040 296 aa10.71□□□□□ -0.7
TPM1-210ENST00000558264 EML3Q32P44 896 aa10.71□□□□□ -0.7
TPM1-210ENST00000558264 ZNF789Q5FWF6 425 aa10.71□□□□□ -0.7
TPM1-210ENST00000558264 AFMIDQ63HM1 303 aa10.71□□□□□ -0.7
TPM1-210ENST00000558264 ZNF470Q6ECI4 717 aa10.71□□□□□ -0.7
TPM1-210ENST00000558264 CEP97Q8IW35 865 aa10.71□□□□□ -0.7
TPM1-210ENST00000558264 ZNF683Q8IZ20 524 aa10.71□□□□□ -0.7
TPM1-210ENST00000558264 LZTR1Q8N653 840 aa10.71□□□□□ -0.7
TPM1-210ENST00000558264 GPATCH11Q8N954 259 aa10.71□□□□□ -0.7
TPM1-210ENST00000558264 PPHLN1Q8NEY8 458 aaKnown RBP10.71□□□□□ -0.7
TPM1-210ENST00000558264 ZNF296Q8WUU4 475 aaPredicted RBP10.71□□□□□ -0.7
TPM1-210ENST00000558264 NSL1Q96IY1 281 aa10.71□□□□□ -0.7
TPM1-210ENST00000558264 SCYL1Q96KG9 808 aa10.71□□□□□ -0.7
TPM1-210ENST00000558264 NKX1-2Q9UD57 310 aaPredicted RBP10.71□□□□□ -0.7
TPM1-210ENST00000558264 MAGEB16A2A368 324 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 MEI4A8MW99 385 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 PRR5-ARHGAP8B1AHC4 643 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 GYG2O15488 501 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 TLR5O60602 858 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 SERPINE1P05121 402 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 GALTP07902 379 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 PIRTP0C851 137 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 FGFR3P22607 806 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 ADRA1AP35348 466 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 ARHGAP8P85298 464 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 MRPL58Q14197 206 aaKnown RBP10.7□□□□□ -0.7
TPM1-210ENST00000558264 PTPRCAPQ14761 206 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 PDPK2PQ6A1A2 396 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 NADSYN1Q6IA69 706 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 TIGD7Q6NT04 549 aaPredicted RBP10.7□□□□□ -0.7
TPM1-210ENST00000558264 FAM117BQ6P1L5 589 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 MSANTD2Q6P1R3 559 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 RNF135Q8IUD6 432 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 PIWIL2Q8TC59 973 aaKnown RBP10.7□□□□□ -0.7
TPM1-210ENST00000558264 PXYLP1Q8TE99 480 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 INPP5DQ92835 1189 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 SGF29Q96ES7 293 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 TSEN34Q9BSV6 310 aaKnown RBP10.7□□□□□ -0.7
TPM1-210ENST00000558264 WWP1Q9H0M0 922 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 PRDM5Q9NQX1 630 aaPredicted RBP10.7□□□□□ -0.7
TPM1-210ENST00000558264 MAN1C1Q9NR34 630 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 TLR8Q9NR97 1041 aaKnown RBP10.7□□□□□ -0.7
TPM1-210ENST00000558264 MTF2Q9Y483 593 aaPredicted RBP10.7□□□□□ -0.7
TPM1-210ENST00000558264 TCAF1Q9Y4C2 921 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 KCTD3Q9Y597 815 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 OR51F1A6NGY5 319 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 G3V2L1 256 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 IL1BP01584 269 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 CHRNGP07510 517 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 PAX3P23760 479 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 OR1E1P30953 314 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 SCN5AQ14524 2016 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 MARC1Q5VT66 337 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 FAM219BQ5XKK7 198 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 PGBD5Q8N414 524 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 POU5F2Q8N7G0 328 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 ZNF781Q8N8C0 355 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 ATP6V0D2Q8N8Y2 350 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 DEFB118Q96PH6 123 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 OMDQ99983 421 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.7□□□□□ -0.7
TPM1-210ENST00000558264 NMRAL1Q9HBL8 299 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 SAR1AQ9NR31 198 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 TRIM17Q9Y577 477 aa10.7□□□□□ -0.7
TPM1-210ENST00000558264 A0A0D9SEW6 157 aa10.69□□□□□ -0.7
TPM1-210ENST00000558264 TIMM44O43615 452 aa10.69□□□□□ -0.7
TPM1-210ENST00000558264 DIAPH2O60879 1101 aa10.69□□□□□ -0.7
TPM1-210ENST00000558264 GJB5O95377 273 aa10.69□□□□□ -0.7
TPM1-210ENST00000558264 RHOQP17081 205 aa10.69□□□□□ -0.7
TPM1-210ENST00000558264 MAGEA12P43365 314 aa10.69□□□□□ -0.7
TPM1-210ENST00000558264 ARCN1P48444 511 aaKnown RBP10.69□□□□□ -0.7
TPM1-210ENST00000558264 RASSF2P50749 326 aa10.69□□□□□ -0.7
TPM1-210ENST00000558264 ABCE1P61221 599 aaKnown RBP10.69□□□□□ -0.7
TPM1-210ENST00000558264 THOC5Q13769 683 aaKnown RBP10.69□□□□□ -0.7
TPM1-210ENST00000558264 TRIP4Q15650 581 aaPredicted RBP10.69□□□□□ -0.7
TPM1-210ENST00000558264 RBM20Q5T481 1227 aaKnown RBP10.69□□□□□ -0.7
TPM1-210ENST00000558264 RANBP10Q6VN20 620 aa10.69□□□□□ -0.7
TPM1-210ENST00000558264 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.69□□□□□ -0.7
TPM1-210ENST00000558264 WDR75Q8IWA0 830 aaKnown RBP10.69□□□□□ -0.7
TPM1-210ENST00000558264 OR52K2Q8NGK3 314 aa10.69□□□□□ -0.7
TPM1-210ENST00000558264 SEPT8Q92599 483 aa10.69□□□□□ -0.7
TPM1-210ENST00000558264 ELMO2Q96JJ3 720 aa10.69□□□□□ -0.7
TPM1-210ENST00000558264 BTN2A3PQ96KV6 586 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms