RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 EPHX3Q9H6B9 360 aa12.3□□□□□ -0.44
HMGB1P8-201ENST00000558211 LMAN1LQ9HAT1 526 aa12.3□□□□□ -0.44
HMGB1P8-201ENST00000558211 LTB4R2Q9NPC1 389 aa12.3□□□□□ -0.44
HMGB1P8-201ENST00000558211 ZDHHC4Q9NPG8 344 aa12.3□□□□□ -0.44
HMGB1P8-201ENST00000558211 RCOR3Q9P2K3 495 aaPredicted RBP12.3□□□□□ -0.44
HMGB1P8-201ENST00000558211 ZNF212Q9UDV6 495 aa12.3□□□□□ -0.44
HMGB1P8-201ENST00000558211 VPS28Q9UK41 221 aa12.3□□□□□ -0.44
HMGB1P8-201ENST00000558211 INTS6Q9UL03 887 aaKnown RBP12.3□□□□□ -0.44
HMGB1P8-201ENST00000558211 TBC1D30Q9Y2I9 924 aa12.3□□□□□ -0.44
HMGB1P8-201ENST00000558211 SLC27A6Q9Y2P4 619 aa12.3□□□□□ -0.44
HMGB1P8-201ENST00000558211 TECTAO75443 2155 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 ILVBLA1L0T0 632 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 WASH4PA8MWX3 477 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 K7EQS6 105 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 DFFAO00273 331 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 DCLK1O15075 740 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 RAMP2O60895 175 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 MAP3K6O95382 1288 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 PYGMP11217 842 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 POLR2EP19388 210 aaKnown RBP12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 NFKB1P19838 968 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 MSNP26038 577 aaKnown RBP12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 ACVRL1P37023 503 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 CETN2P41208 172 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 CDKN2BP42772 138 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 OXCT1P55809 520 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 GNA12Q03113 381 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 POLD3Q15054 466 aaPredicted RBP12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 PLEKHG6Q3KR16 790 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 FUT11Q495W5 492 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 C2orf27AQ580R0 203 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 TMEM215Q68D42 235 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 RNF43Q68DV7 783 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 SUGP1Q8IWZ8 645 aaKnown RBP12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 TP53INP2Q8IXH6 220 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 AHI1Q8N157 1196 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 PQLC3Q8N755 202 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 WFIKKN2Q8TEU8 576 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 CYB5D2Q8WUJ1 264 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 EZH1Q92800 747 aaPredicted RBP12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 LMLNQ96KR4 655 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 FEM1AQ9BSK4 669 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 SLC39A8Q9C0K1 460 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 ATP13A1Q9HD20 1204 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 ELOVL2Q9NXB9 296 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 ZKSCAN5Q9Y2L8 839 aa12.29□□□□□ -0.44
HMGB1P8-201ENST00000558211 RASA4BC9J798 803 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 CBX4O00257 560 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 KCNK3O14649 394 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 APOL1O14791 398 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 RASA4O43374 803 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 FZD6O60353 706 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 SNAP91O60641 907 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 CST8O60676 142 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 SASH3O75995 380 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 DCNP07585 359 aaKnown RBP12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 CHRNB1P11230 501 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 GLDCP23378 1020 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 WASP42768 502 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 TNFRSF4P43489 277 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 SLC12A1Q13621 1099 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 TFDP3Q5H9I0 405 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 CCDC181Q5TID7 509 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 NCBP2-AS2Q69YL0 99 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 LEKR1Q6ZMV7 388 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 ADIPOR2Q86V24 386 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 NPWQ8N729 165 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 UCMAQ8WVF2 138 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 ARHGEF2Q92974 986 aaKnown RBP12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 FAF2Q96CS3 445 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 ERLEC1Q96DZ1 483 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 HMCESQ96FZ2 354 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 RPL10LQ96L21 214 aaKnown RBP12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 NELL2Q99435 816 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 TLR10Q9BXR5 811 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 RETREG1Q9H6L5 497 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 NOL6Q9H6R4 1146 aaKnown RBP12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 DONSONQ9NYP3 566 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 SIT1Q9Y3P8 196 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 JRKLQ9Y4A0 524 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 HEY1Q9Y5J3 304 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 SHROOM3Q8TF72 1996 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 VCANP13611 3396 aa12.28□□□□□ -0.44
HMGB1P8-201ENST00000558211 TTC28Q96AY4 2481 aa12.27□□□□□ -0.45
HMGB1P8-201ENST00000558211 hCG_1818297A0A087WSY0 165 aa12.27□□□□□ -0.45
HMGB1P8-201ENST00000558211 A0A0A0MRY4 1105 aa12.27□□□□□ -0.45
HMGB1P8-201ENST00000558211 FAM86C2PA6NEL3 165 aa12.27□□□□□ -0.45
HMGB1P8-201ENST00000558211 ARHGAP42A6NI28 874 aa12.27□□□□□ -0.45
HMGB1P8-201ENST00000558211 NCAM2O15394 837 aa12.27□□□□□ -0.45
HMGB1P8-201ENST00000558211 MFSD11O43934 449 aa12.27□□□□□ -0.45
HMGB1P8-201ENST00000558211 PDGFAP04085 211 aa12.27□□□□□ -0.45
HMGB1P8-201ENST00000558211 ATP1A1P05023 1023 aaKnown RBP12.27□□□□□ -0.45
HMGB1P8-201ENST00000558211 ATP5BP06576 529 aaKnown RBP12.27□□□□□ -0.45
HMGB1P8-201ENST00000558211 CXCR5P32302 372 aa12.27□□□□□ -0.45
HMGB1P8-201ENST00000558211 SERPINB6P35237 376 aa12.27□□□□□ -0.45
HMGB1P8-201ENST00000558211 PAPOLAP51003 745 aaKnown RBP12.27□□□□□ -0.45
HMGB1P8-201ENST00000558211 NDST2P52849 883 aa12.27□□□□□ -0.45
HMGB1P8-201ENST00000558211 PLK1P53350 603 aa12.27□□□□□ -0.45
HMGB1P8-201ENST00000558211 YBEYP58557 167 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms