RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 APOL1O14791 398 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 THAP12O43422 761 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 JTBO76095 146 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 PRKCBP05771 671 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 TNFSF4P23510 183 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 NTSR1P30989 418 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 KCNC3Q14003 757 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 TBC1D25Q3MII6 688 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 LRRC24Q50LG9 513 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 FAM209BQ5JX69 171 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 KIAA1755Q5JYT7 1200 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 TMEM63BQ5T3F8 832 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 MANEALQ5VSG8 457 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 ANKRD54Q6NXT1 300 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 NFRKBQ6P4R8 1299 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 TMEM184AQ6ZMB5 413 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 C11orf96Q7Z7L8 435 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 SPPL3Q8TCT6 385 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 NTN5Q8WTR8 489 aaPredicted RBP6.5□□□□□ -1.37
RTF1-204ENST00000558117 LENG8Q96PV6 779 aaPredicted RBP6.5□□□□□ -1.37
RTF1-204ENST00000558117 NEK1Q96PY6 1258 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 PRR25Q96S07 402 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 POMKQ9H5K3 350 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 GPR108Q9NPR9 543 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 MYO1AQ9UBC5 1043 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 FBXO4Q9UKT5 387 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 ADAMTS5Q9UNA0 930 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 DUSP12Q9UNI6 340 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 USP22Q9UPT9 525 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 Q9Y3F1 56 aa6.5□□□□□ -1.37
RTF1-204ENST00000558117 LAS1LQ9Y4W2 734 aaKnown RBP6.5□□□□□ -1.37
RTF1-204ENST00000558117 MYH2Q9UKX2 1941 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 A0A1W2PPC4 97 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 A0A1W2PRG0 241 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 TARM1B6A8C7 271 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 AREL1O15033 823 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 PER2O15055 1255 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 INMTO95050 263 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 RETP07949 1114 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 IFIT1P09914 478 aaKnown RBP6.49□□□□□ -1.37
RTF1-204ENST00000558117 ZNF37AP17032 561 aaPredicted RBP6.49□□□□□ -1.37
RTF1-204ENST00000558117 EPHA3P29320 983 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 PGDP52209 483 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 AK2P54819 239 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 PROK1P58294 105 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 TIRAPP58753 221 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 TIAL1Q01085 375 aaKnown RBP eCLIP6.49□□□□□ -1.37
RTF1-204ENST00000558117 E2F1Q01094 437 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 TDGQ13569 410 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 PMS2P11Q13670 270 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 RALBP1Q15311 655 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 NAPRTQ6XQN6 538 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 DZIP1Q86YF9 867 aaKnown RBP6.49□□□□□ -1.37
RTF1-204ENST00000558117 ABHD11Q8NFV4 315 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 SLC39A13Q96H72 371 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 MACROD1Q9BQ69 325 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 SCNM1Q9BWG6 230 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 VN1R3Q9BXE9 311 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 FSD1LQ9BXM9 530 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 FAM83DQ9H4H8 585 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 CLMPQ9H6B4 373 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 TLE6Q9H808 572 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 TBC1D17Q9HA65 648 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 WNT16Q9UBV4 365 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 HPSEQ9Y251 543 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 NLRC5Q86WI3 1866 aa6.49□□□□□ -1.37
RTF1-204ENST00000558117 TRIP12Q14669 1992 aaPredicted RBP6.48□□□□□ -1.37
RTF1-204ENST00000558117 RASA4BC9J798 803 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 RASA4O43374 803 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 PMPCBO75439 489 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 RBMXL2O75526 392 aaKnown RBP6.48□□□□□ -1.37
RTF1-204ENST00000558117 FLOT1O75955 427 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 HARSP12081 509 aaKnown RBP6.48□□□□□ -1.37
RTF1-204ENST00000558117 CCR10P46092 362 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 GATMP50440 423 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 PLCD1P51178 756 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 FHL3Q13643 280 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 PUM3Q15397 648 aaKnown RBP6.48□□□□□ -1.37
RTF1-204ENST00000558117 C4orf46Q504U0 113 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 TATDN1Q6P1N9 297 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 C11orf44Q8N8P7 122 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 FAM133AQ8N9E0 248 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 DBF4BQ8NFT6 615 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 P2RX5Q93086 422 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 REPS1Q96D71 796 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 RSPRY1Q96DX4 576 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 CCDC138Q96M89 665 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 MTG1Q9BT17 334 aaPredicted RBP6.48□□□□□ -1.37
RTF1-204ENST00000558117 COLEC11Q9BWP8 271 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 LPAR3Q9UBY5 353 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 SCN10AQ9Y5Y9 1956 aa6.48□□□□□ -1.37
RTF1-204ENST00000558117 APC2O95996 2303 aa6.47□□□□□ -1.37
RTF1-204ENST00000558117 PTPRQQ9UMZ3 2332 aa6.47□□□□□ -1.37
RTF1-204ENST00000558117 CLCA1A8K7I4 914 aa6.47□□□□□ -1.37
RTF1-204ENST00000558117 WDR46O15213 610 aaKnown RBP6.47□□□□□ -1.37
RTF1-204ENST00000558117 TJP3O95049 919 aa6.47□□□□□ -1.37
RTF1-204ENST00000558117 PRKCGP05129 697 aa6.47□□□□□ -1.37
RTF1-204ENST00000558117 PPP2R1AP30153 589 aa6.47□□□□□ -1.37
RTF1-204ENST00000558117 GKP32189 559 aa6.47□□□□□ -1.37
RTF1-204ENST00000558117 COPB2P35606 906 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms