RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 SERGEFQ9UGK8 458 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 IL36AQ9UHA7 158 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 PPM1HQ9ULR3 514 aa14.58□□□□□ -0.08
USP3-205ENST00000557884 SMG5Q9UPR3 1016 aaKnown RBP14.58□□□□□ -0.08
USP3-205ENST00000557884 ARIH1Q9Y4X5 557 aaPredicted RBP14.58□□□□□ -0.08
USP3-205ENST00000557884 ZFHX2Q9C0A1 2572 aaPredicted RBP14.58□□□□□ -0.08
USP3-205ENST00000557884 hCG_1818297A0A087WSY0 165 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 CXorf51AA0A1B0GTR3 108 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 C1QTNF3-AMACRE9PGA6 284 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 RNF103O00237 685 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 KPNA3O00505 521 aaPredicted RBP14.57□□□□□ -0.08
USP3-205ENST00000557884 KRIT1O00522 736 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 MAFKO60675 156 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 CST8O60676 142 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 RNASEH2AO75792 299 aaKnown RBP14.57□□□□□ -0.08
USP3-205ENST00000557884 IGSF6O95976 241 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 ADH1BP00325 375 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 GSRP00390 522 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 ZFXP17010 805 aaPredicted RBP14.57□□□□□ -0.08
USP3-205ENST00000557884 GARSP41250 739 aaKnown RBP14.57□□□□□ -0.08
USP3-205ENST00000557884 PEX5P50542 639 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 RWDD2BP57060 319 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 SNRPD1P62314 119 aaKnown RBP14.57□□□□□ -0.08
USP3-205ENST00000557884 RPL6Q02878 288 aaKnown RBP14.57□□□□□ -0.08
USP3-205ENST00000557884 ZBTB16Q05516 673 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 ADCY2Q08462 1091 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 ZNF211Q13398 564 aaPredicted RBP14.57□□□□□ -0.08
USP3-205ENST00000557884 TFDP2Q14188 446 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 PLK5Q496M5 336 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 TMCO4Q5TGY1 634 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 AADACL2Q6P093 401 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 ZNF662Q6ZS27 426 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 METTL3Q86U44 580 aaKnown RBP14.57□□□□□ -0.08
USP3-205ENST00000557884 HDDC3Q8N4P3 179 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 AADATQ8N5Z0 425 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 UBL4BQ8N7F7 174 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 OR2AP1Q8NGE2 309 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 NKD2Q969F2 451 aaPredicted RBP14.57□□□□□ -0.08
USP3-205ENST00000557884 HAUS1Q96CS2 278 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 GDAP1L1Q96MZ0 367 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 OMDQ99983 421 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 HEPHQ9BQS7 1158 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 CINPQ9BW66 212 aaPredicted RBP14.57□□□□□ -0.08
USP3-205ENST00000557884 TRMT1Q9NXH9 659 aaKnown RBP14.57□□□□□ -0.08
USP3-205ENST00000557884 FBXL12Q9NXK8 326 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 LHX3Q9UBR4 397 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 EVLQ9UI08 416 aaPredicted RBP14.57□□□□□ -0.08
USP3-205ENST00000557884 RAB23Q9ULC3 237 aa14.57□□□□□ -0.08
USP3-205ENST00000557884 GPR179Q6PRD1 2367 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 ALOX15BO15296 676 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 INSIG1O15503 277 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 DDX3YO15523 660 aaKnown RBP14.56□□□□□ -0.08
USP3-205ENST00000557884 NDUFS2O75306 463 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 LEFTY1O75610 366 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 PEX11BO96011 259 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 PRNPP04156 253 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 PYGMP11217 842 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 MX2P20592 715 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 C5AR1P21730 350 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 CD6P30203 668 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 RGRP47804 291 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 SLC10A7Q0GE19 358 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 ZNF235Q14590 738 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 LBRQ14739 615 aaKnown RBP14.56□□□□□ -0.08
USP3-205ENST00000557884 MYLK3Q32MK0 819 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 TFDP3Q5H9I0 405 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 FAM46CQ5VWP2 391 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 B4GALNT4Q76KP1 1039 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 ARMCX6Q7L4S7 300 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 TMEFF1Q8IYR6 380 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 SUMF1Q8NBK3 374 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 TSEN2Q8NCE0 465 aaKnown RBP14.56□□□□□ -0.08
USP3-205ENST00000557884 CCNYQ8ND76 341 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 NSMCE1Q8WV22 266 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 ZNF599Q96NL3 588 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 ALS2CR12Q96Q35 445 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 HERPUD2Q9BSE4 406 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 GPR174Q9BXC1 333 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 DUSP15Q9H1R2 295 aaPredicted RBP14.56□□□□□ -0.08
USP3-205ENST00000557884 SAE1Q9UBE0 346 aaPredicted RBP14.56□□□□□ -0.08
USP3-205ENST00000557884 SEPT3Q9UH03 358 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 NCKAP1Q9Y2A7 1128 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 WASF2Q9Y6W5 498 aa14.56□□□□□ -0.08
USP3-205ENST00000557884 CKAP5Q14008 2032 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 TTC24A2A3L6 582 aaPredicted RBP14.55□□□□□ -0.08
USP3-205ENST00000557884 MIF4GDA9UHW6 222 aaKnown RBP14.55□□□□□ -0.08
USP3-205ENST00000557884 MUSKO15146 869 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 GJB3O75712 270 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 LMNAP02545 664 aaKnown RBP14.55□□□□□ -0.08
USP3-205ENST00000557884 C7P10643 843 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 PECAM1P16284 738 aaPredicted RBP14.55□□□□□ -0.08
USP3-205ENST00000557884 OXTRP30559 389 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 ACSL1P33121 698 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 CNTN1Q12860 1018 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 RFTN1Q14699 578 aaPredicted RBP14.55□□□□□ -0.08
USP3-205ENST00000557884 ELF2Q15723 593 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 PPP2R5EQ16537 467 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 FAM182AQ5T1J6 154 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 CCDC181Q5TID7 509 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms