RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 MAPK3P27361 379 aaPredicted RBP3.95□□□□□ -1.78
TDP1-217ENST00000557782 CD86P42081 329 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 MATR3P43243 847 aaKnown RBP eCLIP3.95□□□□□ -1.78
TDP1-217ENST00000557782 CCR10P46092 362 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 PIP4K2AP48426 406 aaPredicted RBP3.95□□□□□ -1.78
TDP1-217ENST00000557782 CCR3P51677 355 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 BMXP51813 675 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 JAK3P52333 1124 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 GALCP54803 685 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 F2RL1P55085 397 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 TPD52P55327 224 aaPredicted RBP3.95□□□□□ -1.78
TDP1-217ENST00000557782 YWHAZP63104 245 aaKnown RBP3.95□□□□□ -1.78
TDP1-217ENST00000557782 CAP1Q01518 475 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 CYP4A11Q02928 519 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 TAP1Q03518 808 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 DLX2Q07687 328 aaPredicted RBP3.95□□□□□ -1.78
TDP1-217ENST00000557782 OLIG2Q13516 323 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 VEPH1Q14D04 833 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 PPA1Q15181 289 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 HYAL4Q2M3T9 481 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 TYSND1Q2T9J0 566 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 LETM2Q2VYF4 491 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 SPDYE7PQ495Y7 208 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 GLRA4Q5JXX5 417 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 KRT79Q5XKE5 535 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 SUSD1Q6UWL2 747 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 ADCK2Q7Z695 626 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 SLC9B2Q86UD5 537 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 FAM124AQ86V42 546 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 SIRT6Q8N6T7 355 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 XXYLT1Q8NBI6 393 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 B3GALNT2Q8NCR0 500 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 CTCFLQ8NI51 663 aaPredicted RBP3.95□□□□□ -1.78
TDP1-217ENST00000557782 FIBINQ8TAL6 211 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 UTP15Q8TED0 518 aaKnown RBP3.95□□□□□ -1.78
TDP1-217ENST00000557782 KCNE4Q8WWG9 221 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 XAGE5Q8WWM1 108 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 PTERQ96BW5 349 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 R3HDM4Q96D70 268 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 HDAC11Q96DB2 347 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 AK8Q96MA6 479 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 FERMT1Q9BQL6 677 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 C1QTNF1Q9BXJ1 281 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 CADM1Q9BY67 442 aaKnown RBP3.95□□□□□ -1.78
TDP1-217ENST00000557782 RNF26Q9BY78 433 aaPredicted RBP3.95□□□□□ -1.78
TDP1-217ENST00000557782 IFIH1Q9BYX4 1025 aaKnown RBP3.95□□□□□ -1.78
TDP1-217ENST00000557782 PLK3Q9H4B4 646 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 ST6GALNAC4Q9H4F1 302 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 MID1IP1Q9NPA3 183 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 SLC6A13Q9NSD5 602 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 SIRT3Q9NTG7 399 aaPredicted RBP3.95□□□□□ -1.78
TDP1-217ENST00000557782 INTS13Q9NVM9 706 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 WSB2Q9NYS7 404 aaPredicted RBP3.95□□□□□ -1.78
TDP1-217ENST00000557782 MGAT4CQ9UBM8 478 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 HDAC6Q9UBN7 1215 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 MAFFQ9ULX9 164 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 DHDHQ9UQ10 334 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 LIPT1Q9Y234 373 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 TRGV11A0A075B6L2 103 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 A4D1N5 150 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 MROH6A6NGR9 719 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 LEFTY2O00292 366 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 QSOX1O00391 747 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 CES2O00748 559 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 DSCR3O14972 297 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 ZNF263O14978 683 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 ADAMDEC1O15204 470 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 PAPSS1O43252 624 aaPredicted RBP3.94□□□□□ -1.78
TDP1-217ENST00000557782 KINO60870 393 aaKnown RBP3.94□□□□□ -1.78
TDP1-217ENST00000557782 C22orf31O95567 290 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 ONECUT2O95948 504 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 DLDP09622 509 aaKnown RBP3.94□□□□□ -1.78
TDP1-217ENST00000557782 ALDOCP09972 364 aaKnown RBP3.94□□□□□ -1.78
TDP1-217ENST00000557782 LAG3P18627 525 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 CD72P21854 359 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 CDAP32320 146 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 RAB28P51157 221 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 CAPZA1P52907 286 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 TPTEP56180 551 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 SLC37A1P57057 533 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 IL1RL1Q01638 556 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 TFAP4Q01664 338 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 DEUP1Q05D60 604 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 ACTN3Q08043 901 aaPredicted RBP3.94□□□□□ -1.78
TDP1-217ENST00000557782 ACSM2AQ08AH3 577 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 GRAPQ13588 217 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 RUNX2Q13950 521 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 IL11RAQ14626 422 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 PPP2R5BQ15173 497 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 RNPS1Q15287 305 aaKnown RBP3.94□□□□□ -1.78
TDP1-217ENST00000557782 HIST2H2ACQ16777 129 aaPredicted RBP3.94□□□□□ -1.78
TDP1-217ENST00000557782 GEN1Q17RS7 908 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 ERCC6LQ2NKX8 1250 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 PCGF3Q3KNV8 242 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 IGSF11Q5DX21 431 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 NHSL2Q5HYW2 709 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 ACSM2BQ68CK6 577 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 TXNDC8Q6A555 127 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 CASC1Q6TDU7 716 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 DPY19L3Q6ZPD9 716 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms