RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 STK4Q13043 487 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 SLC14A1Q13336 389 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 COG2Q14746 738 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 TAF7Q15545 349 aaPredicted RBP3.54□□□□□ -1.84
FOXN3-217ENST00000557572 CYP1B1Q16678 543 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 KYNUQ16719 465 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 WDR73Q6P4I2 378 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 IYDQ6PHW0 289 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 KLHL17Q6TDP4 642 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 RRAGAQ7L523 313 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 PIWIL3Q7Z3Z3 882 aaKnown RBP3.54□□□□□ -1.84
FOXN3-217ENST00000557572 CPLX4Q7Z7G2 160 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 ADGRA1Q86SQ6 560 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 TBC1D21Q8IYX1 336 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 SRBD1Q8N5C6 995 aaKnown RBP3.54□□□□□ -1.84
FOXN3-217ENST00000557572 LINC01465Q8N7H1 131 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 DBF4BQ8NFT6 615 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 XAGE5Q8WWM1 108 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 KRT35Q92764 455 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 NMD3Q96D46 503 aaKnown RBP3.54□□□□□ -1.84
FOXN3-217ENST00000557572 LRRC46Q96FV0 321 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 REEP2Q9BRK0 252 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 TEX13BQ9BXU2 312 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 ANKRD2Q9GZV1 360 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 TAF1DQ9H5J8 278 aaPredicted RBP3.54□□□□□ -1.84
FOXN3-217ENST00000557572 SYNCQ9H7C4 482 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 SMURF2Q9HAU4 748 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 BRF2Q9HAW0 419 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 PDE7BQ9NP56 450 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 FANCFQ9NPI8 374 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 RXFP3Q9NSD7 469 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 PNPOQ9NVS9 261 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 MCM9Q9NXL9 1143 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 COQ3Q9NZJ6 369 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 RGL1Q9NZL6 768 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 AFF4Q9UHB7 1163 aaKnown RBP3.54□□□□□ -1.84
FOXN3-217ENST00000557572 TBX20Q9UMR3 447 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 SHOC2Q9UQ13 582 aa3.54□□□□□ -1.84
FOXN3-217ENST00000557572 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.54□□□□□ -1.84
FOXN3-217ENST00000557572 TRIM43BA6NCK2 446 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 PTGES3LE9PB15 166 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 PES1O00541 588 aaKnown RBP3.53□□□□□ -1.84
FOXN3-217ENST00000557572 VILLO15195 856 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 TSPAN3O60637 253 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 ACTL6BO94805 426 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 SLU7O95391 586 aaKnown RBP3.53□□□□□ -1.84
FOXN3-217ENST00000557572 MT-CO3P00414 261 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 CSF1RP07333 972 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 SNRNP70P08621 437 aaKnown RBP3.53□□□□□ -1.84
FOXN3-217ENST00000557572 CNPP09543 421 aaKnown RBP3.53□□□□□ -1.84
FOXN3-217ENST00000557572 CYP2C9P11712 490 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 GAP43P17677 238 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 BTF3P20290 206 aaKnown RBP3.53□□□□□ -1.84
FOXN3-217ENST00000557572 THPOP40225 353 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 AARSP49588 968 aaKnown RBP eCLIP3.53□□□□□ -1.84
FOXN3-217ENST00000557572 ZNF41P51814 821 aaPredicted RBP3.53□□□□□ -1.84
FOXN3-217ENST00000557572 ARFIP2P53365 341 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 WNT3P56703 355 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 HSF1Q00613 529 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 NFE2L1Q14494 772 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 BAK1Q16611 211 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 AMOTQ4VCS5 1084 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 BMP2KLQ5H9B9 411 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 ATG16L1Q676U5 607 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 RGS7BPQ6MZT1 257 aaPredicted RBP3.53□□□□□ -1.84
FOXN3-217ENST00000557572 KDELC1Q6UW63 502 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 UNC13DQ70J99 1090 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 ZER1Q7Z7L7 766 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 PPP1R3BQ86XI6 285 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 SPATA2LQ8IUW3 424 aaPredicted RBP3.53□□□□□ -1.84
FOXN3-217ENST00000557572 CCDC117Q8IWD4 279 aaPredicted RBP3.53□□□□□ -1.84
FOXN3-217ENST00000557572 UNC45BQ8IWX7 931 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 RPAP2Q8IXW5 612 aaPredicted RBP3.53□□□□□ -1.84
FOXN3-217ENST00000557572 DIS3L2Q8IYB7 885 aaKnown RBP3.53□□□□□ -1.84
FOXN3-217ENST00000557572 FBXL14Q8N1E6 418 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 MIGA1Q8NAN2 632 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 SPC24Q8NBT2 197 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 GSDMBQ8TAX9 411 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 SPATA18Q8TC71 538 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 NEUROG1Q92886 237 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 SLC25A28Q96A46 364 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 TRIM43Q96BQ3 446 aaPredicted RBP3.53□□□□□ -1.84
FOXN3-217ENST00000557572 FEM1CQ96JP0 617 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 CCDC17Q96LX7 622 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 PRPF18Q99633 342 aaKnown RBP3.53□□□□□ -1.84
FOXN3-217ENST00000557572 FSD1Q9BTV5 496 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 HGH1Q9BTY7 390 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 ACAT2Q9BWD1 397 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 TRIM54Q9BYV2 358 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 OPA3Q9H6K4 179 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 ERVK-5Q9HDB9 667 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 NECTIN3Q9NQS3 549 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 PRDM8Q9NQV8 689 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 TBC1D23Q9NUY8 699 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 TBC1D14Q9P2M4 693 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 LAMP5Q9UJQ1 280 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 AMFRQ9UKV5 643 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 HSF4Q9ULV5 492 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 CAMK2AQ9UQM7 478 aa3.53□□□□□ -1.84
FOXN3-217ENST00000557572 TMEM5Q9Y2B1 443 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms