RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 DNAJC16Q9Y2G8 782 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 TAF6LQ9Y6J9 622 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 ELP6Q0PNE2 266 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 KDELC2Q7Z4H8 507 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 TBC1D21Q8IYX1 336 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 CDHR2Q9BYE9 1310 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 TRIM64A6NGJ6 449 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 DDX3XO00571 662 aaKnown RBP eCLIP8.93□□□□□ -0.98
SYNE3-205ENST00000557275 KBTBD2Q8IY47 623 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 ATXN3LQ9H3M9 355 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 VPS4AQ9UN37 437 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 RRN3P2A6NIE6 340 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 CLCA1A8K7I4 914 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 F5H423 210 aaPredicted RBP8.93□□□□□ -0.98
SYNE3-205ENST00000557275 RPP38P78345 283 aaKnown RBP8.93□□□□□ -0.98
SYNE3-205ENST00000557275 SGMS1Q86VZ5 419 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 OPTCQ9UBM4 332 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 ASTN2O75129 1339 aaPredicted RBP8.93□□□□□ -0.98
SYNE3-205ENST00000557275 MYH14Q7Z406 1995 aaKnown RBP8.93□□□□□ -0.98
SYNE3-205ENST00000557275 UBXN2AP68543 259 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 TDGQ13569 410 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 PAMR1Q6UXH9 720 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 SYT4Q9H2B2 425 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 METTL8Q9H825 291 aaKnown RBP8.93□□□□□ -0.98
SYNE3-205ENST00000557275 RAB26Q9ULW5 256 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 ZNF451Q9Y4E5 1061 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 CLUHO75153 1309 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 SEC22BO75396 215 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 POC1BQ8TC44 478 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 GIPC3Q8TF64 312 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 NR1I3Q14994 352 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 FBXO36Q8NEA4 188 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 ZNF75CPQ92670 426 aaPredicted RBP8.93□□□□□ -0.98
SYNE3-205ENST00000557275 RETREG1Q9H6L5 497 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 LEF1Q9UJU2 399 aaPredicted RBP8.93□□□□□ -0.98
SYNE3-205ENST00000557275 CLPXO76031 633 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 TIE1P35590 1138 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 MMP14P50281 582 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 OR8H3Q8N146 312 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 NELL1Q92832 810 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 ZNF354BQ96LW1 612 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 TBCCD1Q9NVR7 557 aa8.93□□□□□ -0.98
SYNE3-205ENST00000557275 MRPS7Q9Y2R9 242 aaKnown RBP8.93□□□□□ -0.98
SYNE3-205ENST00000557275 CDC42BPBQ9Y5S2 1711 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 PDCD5O14737 125 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 SLC2A4P14672 509 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 ATXN7L2Q5T6C5 722 aaPredicted RBP8.92□□□□□ -0.98
SYNE3-205ENST00000557275 RTL4Q6ZR62 310 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 FBXW8Q8N3Y1 598 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 ACMSDQ8TDX5 336 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 PPP1R16AQ96I34 528 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 PSMD13Q9UNM6 376 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 MRPS33Q9Y291 106 aaKnown RBP8.92□□□□□ -0.98
SYNE3-205ENST00000557275 TTLL8A6PVC2 850 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 CASKO14936 926 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 CSN2P05814 226 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 RPL4P36578 427 aaKnown RBP8.92□□□□□ -0.98
SYNE3-205ENST00000557275 CCSAPQ6IQ19 270 aaPredicted RBP8.92□□□□□ -0.98
SYNE3-205ENST00000557275 PPP1R16BQ96T49 567 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 MMP19Q99542 508 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 MIPEPQ99797 713 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 DDX20Q9UHI6 824 aaKnown RBP8.92□□□□□ -0.98
SYNE3-205ENST00000557275 ALDH7A1P49419 539 aaKnown RBP8.92□□□□□ -0.98
SYNE3-205ENST00000557275 ACSM2AQ08AH3 577 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 EPHA7Q15375 998 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 ACSM2BQ68CK6 577 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 C12orf56Q8IXR9 622 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 RNF149Q8NC42 400 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 DNAJC28Q9NX36 388 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 ADAM28Q9UKQ2 775 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 ARL5CA6NH57 179 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 UBOX5O94941 541 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 COMTP21964 271 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 BORAQ6PGQ7 559 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 PPP3R2Q96LZ3 170 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 TUBGCP5Q96RT8 1024 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 GPER1Q99527 375 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 CAPN10Q9HC96 672 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 HCN3Q9P1Z3 774 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 RCOR3Q9P2K3 495 aaPredicted RBP8.92□□□□□ -0.98
SYNE3-205ENST00000557275 USP17L5A8MUK1 530 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 SLC6A2P23975 617 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 HNF4AP41235 474 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 ANXA8L1Q5VT79 327 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 TCEAL3Q969E4 200 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 HPDLQ96IR7 371 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 FANCFQ9NPI8 374 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 ALG6Q9Y672 507 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 KBTBD13C9JR72 458 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 PMPCBO75439 489 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 FSHRP23945 695 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 PIK3R6Q5UE93 754 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 KAT5Q92993 513 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 PNKPQ96T60 521 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 SAMD9LQ8IVG5 1584 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 LRRIQ1Q96JM4 1722 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 OR2AT4A6NND4 320 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 MRASO14807 208 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 NR2C1P13056 603 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 TNNI3P19429 210 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms