RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 PRKAB1Q9Y478 270 aa4.9□□□□□ -1.63
ATXN3-238ENST00000556288 ASB3Q9Y575 518 aa4.9□□□□□ -1.63
ATXN3-238ENST00000556288 NUP205Q92621 2012 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 UBA6A0AVT1 1052 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-238ENST00000556288 SYCE3A1L190 88 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 TMEM221A6NGB7 291 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 MROH6A6NGR9 719 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 OTOL1A6NHN0 477 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-238ENST00000556288 SMTNL1A8MU46 457 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 BECN2A8MW95 431 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 F8VP50 259 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 PI4K2BG5E9Z4 385 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 M0R296 226 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 NOBOXO60393 691 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 KLHL18O94889 574 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 LETM1O95202 739 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-238ENST00000556288 FGF19O95750 216 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 INHBBP09529 407 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 FAM163BP0C2L3 166 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 FAM200BP0CF97 657 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 ATF6P18850 670 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 HDCP19113 662 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 YWHAQP27348 245 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 CDC25CP30307 473 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 GDI1P31150 447 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 HOXA9P31269 272 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 AVPR1AP37288 418 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 CCR2P41597 374 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 LSSP48449 732 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 MFAP3P55082 362 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 SLC8A3P57103 927 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 GPC5P78333 572 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 IL13RA1P78552 427 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 ALDH6A1Q02252 535 aaKnown RBP4.89□□□□□ -1.63
ATXN3-238ENST00000556288 NFATC3Q12968 1075 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 CUL2Q13617 745 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 DHCR24Q15392 516 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 PTPN21Q16825 1174 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 ANO6Q4KMQ2 910 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 FAM78AQ5JUQ0 283 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 TMEM31Q5JXX7 168 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 STXBP5Q5T5C0 1151 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 GJB7Q6PEY0 223 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 TMEM270Q6UE05 265 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 GBP6Q6ZN66 633 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 C11orf57Q6ZUT1 292 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-238ENST00000556288 DENND5BQ6ZUT9 1274 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 TTLL10Q6ZVT0 673 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 MTSS1LQ765P7 747 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 UNC93AQ86WB7 457 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 ARID3BQ8IVW6 561 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-238ENST00000556288 ARHGEF19Q8IW93 802 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 NUP93Q8N1F7 819 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 AOPEPQ8N6M6 819 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 SCAMP5Q8TAC9 235 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 SPATA18Q8TC71 538 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 CSGALNACT1Q8TDX6 532 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 EDAQ92838 391 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 FGF14Q92915 247 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 FBXO32Q969P5 355 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 PSMG2Q969U7 264 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 SLC35C1Q96A29 364 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 SMARCD1Q96GM5 515 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 TMEM176AQ96HP8 235 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 SCYL1Q96KG9 808 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 C16orf92Q96LL3 132 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 TUBGCP5Q96RT8 1024 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 TUBGCP2Q9BSJ2 902 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 TRMT61BQ9BVS5 477 aaKnown RBP4.89□□□□□ -1.63
ATXN3-238ENST00000556288 C1QTNF1Q9BXJ1 281 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 PLA2G2FQ9BZM2 168 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 GPR88Q9GZN0 384 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 ELOVL4Q9GZR5 314 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 INTS2Q9H0H0 1204 aaKnown RBP4.89□□□□□ -1.63
ATXN3-238ENST00000556288 OR10A5Q9H207 317 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 THAP9Q9H5L6 903 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 BRD9Q9H8M2 597 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 BARX1Q9HBU1 254 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-238ENST00000556288 TAB2Q9NYJ8 693 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 TRPM5Q9NZQ8 1165 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 GCNT4Q9P109 453 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 IGSF9Q9P2J2 1179 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 UXTQ9UBK9 157 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-238ENST00000556288 HESX1Q9UBX0 185 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 HMGXB4Q9UGU5 601 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 SORCS3Q9UPU3 1222 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 NFE2L3Q9Y4A8 694 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 NME7Q9Y5B8 376 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 ZFP37Q9Y6Q3 630 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-238ENST00000556288 NUMBLQ9Y6R0 609 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 ADAMTS20P59510 1910 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 CACNA1IQ9P0X4 2223 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 THADAQ6YHU6 1953 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 SHROOM3Q8TF72 1996 aa4.89□□□□□ -1.63
ATXN3-238ENST00000556288 TECTAO75443 2155 aa4.88□□□□□ -1.63
ATXN3-238ENST00000556288 TRAV19A0A0A6YYK7 116 aa4.88□□□□□ -1.63
ATXN3-238ENST00000556288 C9orf118A6NHY6 69 aa4.88□□□□□ -1.63
ATXN3-238ENST00000556288 HEPACAM2A8MVW5 462 aa4.88□□□□□ -1.63
ATXN3-238ENST00000556288 GOLGA6L19H0YKK7 550 aa4.88□□□□□ -1.63
ATXN3-238ENST00000556288 ZNF263O14978 683 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms