RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 ADAMTS6Q9UKP5 1117 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 PAXBP1Q9Y5B6 917 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-236ENST00000556220 CSMD1Q96PZ7 3565 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 POLQO75417 2590 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 HHLA1C9JL84 531 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 FANCGO15287 622 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 LATO43561 262 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 PPFIA2O75334 1257 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 RNASEH2AO75792 299 aaKnown RBP7.11□□□□□ -1.27
ATXN3-236ENST00000556220 HMBSP08397 361 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 GIMD1P0DJR0 217 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 DLATP10515 647 aaKnown RBP7.11□□□□□ -1.27
ATXN3-236ENST00000556220 RALAP11233 206 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 PABPC1P11940 636 aaKnown RBP7.11□□□□□ -1.27
ATXN3-236ENST00000556220 CCDC130P13994 396 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 GOT1P17174 413 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 GAP43P17677 238 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 TNNI1P19237 187 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 SLC8A1P32418 973 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 CD96P40200 585 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 HARS2P49590 506 aaKnown RBP7.11□□□□□ -1.27
ATXN3-236ENST00000556220 CASP5P51878 434 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 NEK4P51957 841 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 KIF11P52732 1056 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 MYL6P60660 151 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 TRPC3Q13507 836 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 ALCAMQ13740 583 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 STAT4Q14765 748 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 LRRC14Q15048 493 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 CST6Q15828 149 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 BMT2Q1RMZ1 405 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 MPPE1Q53F39 396 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 MBLAC2Q68D91 279 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 NAPEPLDQ6IQ20 393 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 CLEC14AQ86T13 490 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 ACOT1Q86TX2 421 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 PRPF39Q86UA1 669 aaKnown RBP7.11□□□□□ -1.27
ATXN3-236ENST00000556220 ZC3H3Q8IXZ2 948 aaKnown RBP7.11□□□□□ -1.27
ATXN3-236ENST00000556220 AHI1Q8N157 1196 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 CRYBG2Q8N1P7 616 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 ARL14Q8N4G2 192 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 FAM26EQ8N5C1 309 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 OR14C36Q8NHC7 312 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 MAPK15Q8TD08 544 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 SYAP1Q96A49 352 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-236ENST00000556220 DNAJC19Q96DA6 116 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 ATXN7L3BQ96GX2 97 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 XYLT2Q9H1B5 865 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 SLC25A18Q9H1K4 315 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 MTG2Q9H4K7 406 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 SMYD3Q9H7B4 428 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 USP29Q9HBJ7 922 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 KIAA1586Q9HCI6 787 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 ABCB8Q9NUT2 735 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 KLHL11Q9NVR0 708 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 UCKL1Q9NWZ5 548 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 CLIC5Q9NZA1 410 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 ARHGAP20Q9P2F6 1191 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 RASAL2Q9UJF2 1139 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 GGA2Q9UJY4 613 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 FZD4Q9ULV1 537 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 PCDHA5Q9Y5H7 936 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 ENTPD2Q9Y5L3 495 aa7.11□□□□□ -1.27
ATXN3-236ENST00000556220 TBC1D3DA0A087WVF3 549 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 TBC1D3IA0A087WXS9 549 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 TBC1D3EA0A087X179 549 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 TBC1D3KA0A087X1G2 549 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 LY6G6EA0A0G2JKS1 128 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 BLACEA4D250 179 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 TBC1D3FA6NER0 549 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-236ENST00000556220 TBC1D3LB9A6J9 549 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 TNFSF15O95150 251 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 TBC1D3HP0C7X1 549 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 FAM200BP0CF97 657 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 THEGLP0DJG4 465 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 POLR2EP19388 210 aaKnown RBP7.1□□□□□ -1.27
ATXN3-236ENST00000556220 TGM2P21980 687 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 NTF4P34130 210 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 NUDT1P36639 197 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 ADPRHP54922 357 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 PPP2CBP62714 309 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 PPP2CAP67775 309 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 EFEMP1Q12805 493 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 IGFBP7Q16270 282 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 HNRNPA1L2Q32P51 320 aaKnown RBP7.1□□□□□ -1.27
ATXN3-236ENST00000556220 C9orf64Q5T6V5 341 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 TBC1D3GQ6DHY5 549 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 TBC1D3CQ6IPX1 549 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 CLEC20AQ6ZU45 233 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 SND1Q7KZF4 910 aaKnown RBP eCLIP7.1□□□□□ -1.27
ATXN3-236ENST00000556220 CCDC186Q7Z3E2 898 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 MMAAQ8IVH4 418 aaKnown RBP7.1□□□□□ -1.27
ATXN3-236ENST00000556220 TBC1D3Q8IZP1 549 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-236ENST00000556220 C12orf29Q8N999 325 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 KCT2Q8NC54 265 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 LRRN4CLQ8ND94 238 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 RASSF8Q8NHQ8 419 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 IFI44Q8TCB0 444 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 GRIN3AQ8TCU5 1115 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms