RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 CCDC170Q8IYT3 715 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 ZCCHC9Q8N567 271 aaKnown RBP15.46■□□□□ 0.07
ACTN1-217ENST00000556203 OR2T34Q8NGX1 318 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 CASKIN2Q8WXE0 1202 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 RFFLQ8WZ73 363 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 FAM131CQ96AQ9 280 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 ARRDC3Q96B67 414 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 HEPHQ9BQS7 1158 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 DYRK4Q9NR20 520 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 KLHL11Q9NVR0 708 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 UBA2Q9UBT2 640 aaPredicted RBP15.46■□□□□ 0.07
ACTN1-217ENST00000556203 SLC6A14Q9UN76 642 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 MFHAS1Q9Y4C4 1052 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 WASF2Q9Y6W5 498 aa15.46■□□□□ 0.07
ACTN1-217ENST00000556203 A0A1B0GTW7 788 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 SOWAHDA6NJG2 315 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 J3KR12 359 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 BCAT2O15382 392 aaPredicted RBP15.45■□□□□ 0.06
ACTN1-217ENST00000556203 PLRG1O43660 514 aaKnown RBP15.45■□□□□ 0.06
ACTN1-217ENST00000556203 PRAMEF11O60813 436 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 MTA2O94776 668 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 GSRP00390 522 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 IGHV4-34P06331 123 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 CD48P09326 243 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 ENGP17813 658 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 SDHBP21912 280 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 MAGEA1P43355 309 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 SPA17Q15506 151 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 ATP13A4Q4VNC1 1196 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 INO80DQ53TQ3 878 aaPredicted RBP15.45■□□□□ 0.06
ACTN1-217ENST00000556203 ATXN7L2Q5T6C5 722 aaPredicted RBP15.45■□□□□ 0.06
ACTN1-217ENST00000556203 STPG1Q5TH74 334 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 TMCO3Q6UWJ1 677 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 TP53INP2Q8IXH6 220 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 LZTR1Q8N653 840 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 OR2AP1Q8NGE2 309 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 TSC1Q92574 1164 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 ZDHHC6Q9H6R6 413 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 PDFQ9HBH1 243 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 CAPN10Q9HC96 672 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 ETNK2Q9NVF9 386 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 DLL3Q9NYJ7 618 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 SLCO1B1Q9Y6L6 691 aa15.45■□□□□ 0.06
ACTN1-217ENST00000556203 TBC1D3DA0A087WVF3 549 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 TBC1D3IA0A087WXS9 549 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 TBC1D3EA0A087X179 549 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 TBC1D3KA0A087X1G2 549 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 TBC1D3FA6NER0 549 aaPredicted RBP15.44■□□□□ 0.06
ACTN1-217ENST00000556203 TBC1D3LB9A6J9 549 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 SLC30A4O14863 429 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 LCA5LO95447 670 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 KRT7P08729 469 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 TBC1D3HP0C7X1 549 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 FECHP22830 423 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 CD27P26842 260 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 GKP32189 559 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 CYLC1P35663 651 aaPredicted RBP15.44■□□□□ 0.06
ACTN1-217ENST00000556203 ARHGAP25P42331 645 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 MAPK8P45983 427 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 ARSEP51690 589 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 LIMK1P53667 647 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 RHOAP61586 193 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 PPP2CBP62714 309 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 PPP2CAP67775 309 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 CCDC15Q0P6D6 951 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 MMRN1Q13201 1228 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 PUM1Q14671 1186 aaKnown RBP eCLIP15.44■□□□□ 0.06
ACTN1-217ENST00000556203 CYTH1Q15438 398 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 MYLK3Q32MK0 819 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 ZFYVE27Q5T4F4 411 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 PIP5KL1Q5T9C9 394 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 TBC1D3GQ6DHY5 549 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 TBC1D3CQ6IPX1 549 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 ARHGAP36Q6ZRI8 547 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 ERN2Q76MJ5 926 aaKnown RBP15.44■□□□□ 0.06
ACTN1-217ENST00000556203 TMTC1Q8IUR5 882 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 TBC1D3Q8IZP1 549 aaPredicted RBP15.44■□□□□ 0.06
ACTN1-217ENST00000556203 KCTD6Q8NC69 237 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 FAM71BQ8TC56 605 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 PPP1R16AQ96I34 528 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 GDAP1L1Q96MZ0 367 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 SP110Q9HB58 689 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 RCOR3Q9P2K3 495 aaPredicted RBP15.44■□□□□ 0.06
ACTN1-217ENST00000556203 PCDHA13Q9Y5I0 950 aa15.44■□□□□ 0.06
ACTN1-217ENST00000556203 A0A1W2PPC4 97 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 C4orf47A7E2U8 309 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 C10orf142B7Z368 130 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 KRIT1O00522 736 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 CDX4O14627 284 aaPredicted RBP15.43■□□□□ 0.06
ACTN1-217ENST00000556203 POP4O95707 220 aaKnown RBP15.43■□□□□ 0.06
ACTN1-217ENST00000556203 IGSF6O95976 241 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 IL4RP24394 825 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 ITGB7P26010 798 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 CDC25BP30305 580 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 CCR5P51681 352 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 ATXN3P54252 364 aaPredicted RBP15.43■□□□□ 0.06
ACTN1-217ENST00000556203 DPYSL3Q14195 570 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 PDK2Q15119 407 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 TCEAL1Q15170 157 aa15.43■□□□□ 0.06
ACTN1-217ENST00000556203 SPC24Q8NBT2 197 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms