RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	HIST1H2AJ	Q99878	128 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	H2AFJ	Q9BTM1	129 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	EFCAB1	Q9HAE3	211 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	IARS2	Q9NSE4	1012 aa	Known RBP	12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	SPAST	Q9UBP0	616 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	TRPV2	Q9Y5S1	764 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	NUMA1	Q14980	2115 aa		12.46	□□□□□ -0.42
TMPO-212	ENST00000556029	GCAT	O75600	419 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	PROC	P04070	461 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	SP100	P23497	879 aa	Predicted RBP	12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	IL4R	P24394	825 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	BRCC3	P46736	316 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	ABCE1	P61221	599 aa	Known RBP	12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	EFEMP1	Q12805	493 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	CTXN3	Q4LDR2	81 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	APLF	Q8IW19	511 aa	Predicted RBP	12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	TMCO5A	Q8N6Q1	288 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	NRG4	Q8WWG1	115 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	SEMA6A	Q9H2E6	1030 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	PDP2	Q9P2J9	529 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	C2CD2	Q9Y426	696 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	FAM159B	A6NKW6	160 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	PRRG1	O14668	218 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	TSPAN1	O60635	241 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	TSC22D2	O75157	780 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	SH3BGRL	O75368	114 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	C22orf31	O95567	290 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	IL1B	P01584	269 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	CSHL1	Q14406	222 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	NRF1	Q16656	503 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	OLFML1	Q6UWY5	402 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	SH2D5	Q6ZV89	423 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	PLEKHM3	Q6ZWE6	761 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	STRA8	Q7Z7C7	330 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	ANKRD23	Q86SG2	305 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	CATSPER2	Q96P56	530 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	APBA2	Q99767	749 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	CDV3	Q9UKY7	258 aa	Known RBP	12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	PHIP	Q8WWQ0	1821 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029		F8W8V4	182 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	DARS	P14868	501 aa	Known RBP	12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	GOT1	P17174	413 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	MSX2	P35548	267 aa	Predicted RBP	12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	SP3	Q02447	781 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	PDK1	Q15118	436 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	SPDYE7P	Q495Y7	208 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	GLMN	Q92990	594 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	CSPG4P5	Q96PW8	444 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	TMEM245	Q9H330	911 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	BLOC1S6	Q9UL45	172 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	KIAA0100	Q14667	2235 aa	Known RBP	12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	NT5C1B-RDH14	C9J2C7	533 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	RHOBTB1	O94844	696 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	ITGBL1	O95965	494 aa	Predicted RBP	12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	SERPINE1	P05121	402 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	ETS2	P15036	469 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	FGFR3	P22607	806 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	CCNF	P41002	786 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	CCL23	P55773	120 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	POU4F1	Q01851	419 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	RNF220	Q5VTB9	566 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	TFAP2D	Q7Z6R9	452 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	PATL1	Q86TB9	770 aa	Known RBP	12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	CLEC4C	Q8WTT0	213 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029	CLIC5	Q9NZA1	410 aa		12.45	□□□□□ -0.42
TMPO-212	ENST00000556029		A0A0A0MRY4	1105 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	SMIM28	A0A1B0GU29	152 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	FAM95C	A0A1B0GW59	222 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	DPYSL4	O14531	572 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	USP1	O94782	785 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	ATP5B	P06576	529 aa	Known RBP	12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	L1CAM	P32004	1257 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	FBXW4	P57775	412 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	INCA1	Q0VD86	236 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	CMPK2	Q5EBM0	449 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	FAM171A1	Q5VUB5	890 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	PACS1	Q6VY07	963 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	GPR141	Q7Z602	305 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	ZDHHC17	Q8IUH5	632 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	GSTCD	Q8NEC7	633 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	RTP4	Q96DX8	246 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	SPATA13	Q96N96	652 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	TMEM79	Q9BSE2	394 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	SLC7A8	Q9UHI5	535 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	RNF103	O00237	685 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	NR5A2	O00482	541 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	LZTS3	O60299	673 aa	Predicted RBP	12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	CPA3	P15088	417 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	PTPN1	P18031	435 aa	Known RBP	12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	ALDH7A1	P49419	539 aa	Known RBP	12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	POU6F1	Q14863	301 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	QKI	Q96PU8	341 aa	Known RBP eCLIP	12.44	□□□□□ -0.42	6e-7	■■■■□ 24.2
TMPO-212	ENST00000556029	KCTD15	Q96SI1	283 aa	Predicted RBP	12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	IL1RAPL1	Q9NZN1	696 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	CCDC167	Q9P0B6	97 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	IPP	Q9Y573	584 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	ZNF646	O15015	1829 aa	Predicted RBP	12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	ARID2	Q68CP9	1835 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	ITM2A	O43736	263 aa		12.44	□□□□□ -0.42
TMPO-212	ENST00000556029	FKBP6	O75344	327 aa		12.44	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms