RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 CEP85LQ5SZL2 805 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 SLC9A4Q6AI14 798 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 PM20D1Q6GTS8 502 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 HIBCHQ6NVY1 386 aaPredicted RBP7.01□□□□□ -1.29
SLIRP-204ENST00000555890 C4orf22Q6V702 233 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 CYP4V2Q6ZWL3 525 aaPredicted RBP7.01□□□□□ -1.29
SLIRP-204ENST00000555890 PDZD4Q76G19 769 aaPredicted RBP7.01□□□□□ -1.29
SLIRP-204ENST00000555890 BEND5Q7L4P6 421 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 HOOK3Q86VS8 718 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 CCDC25Q86WR0 208 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 CDKL3Q8IVW4 592 aaPredicted RBP7.01□□□□□ -1.29
SLIRP-204ENST00000555890 ZMIZ2Q8NF64 920 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 FAM76AQ8TAV0 307 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 NT5C3BQ969T7 300 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 EXOC4Q96A65 974 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 FUBP3Q96I24 572 aaKnown RBP eCLIP7.01□□□□□ -1.29
SLIRP-204ENST00000555890 KCNK16Q96T55 309 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 PKMYT1Q99640 499 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 FERMT1Q9BQL6 677 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 APOL5Q9BWW9 433 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 ZCWPW1Q9H0M4 648 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 POMKQ9H5K3 350 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 TLE6Q9H808 572 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 GPATCH2LQ9NWQ4 482 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 GOLGA6AQ9NYA3 693 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 KLHL42Q9P2K6 505 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 CYP8B1Q9UNU6 501 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 PRG3Q9Y2Y8 225 aaPredicted RBP7.01□□□□□ -1.29
SLIRP-204ENST00000555890 APC2O95996 2303 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 SYNJ2BP-COX16A0A087WUM0 186 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 BCLAF3A2AJT9 711 aaKnown RBP7□□□□□ -1.29
SLIRP-204ENST00000555890 A6NNZ2 444 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 YJEFN3A6XGL0 299 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 HHLA1C9JL84 531 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 E7ENQ6 273 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 NRP1O14786 923 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 NUDT17P0C025 328 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 CYP2F1P24903 491 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 CDR1P51861 262 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 ZNF135P52742 658 aaPredicted RBP7□□□□□ -1.29
SLIRP-204ENST00000555890 GYS2P54840 703 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 SRSF11Q05519 484 aaKnown RBP7□□□□□ -1.29
SLIRP-204ENST00000555890 SMARCB1Q12824 385 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 NME3Q13232 169 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 XRCC4Q13426 336 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 TDGQ13569 410 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 BTG3Q14201 252 aaPredicted RBP7□□□□□ -1.29
SLIRP-204ENST00000555890 MORF4L2Q15014 288 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 NOMO1Q15155 1222 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 SF3A2Q15428 464 aaKnown RBP7□□□□□ -1.29
SLIRP-204ENST00000555890 TERF2Q15554 542 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 UAP1Q16222 522 aaPredicted RBP7□□□□□ -1.29
SLIRP-204ENST00000555890 CCDC142Q17RM4 750 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 TUBB8Q3ZCM7 444 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 CTXN3Q4LDR2 81 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 SLC39A12Q504Y0 691 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 RAB6CQ53S08 254 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 LCE2CQ5TA81 110 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 AGBL2Q5U5Z8 902 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 FAM171A1Q5VUB5 890 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 BSPRYQ5W0U4 402 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 BTBD8Q5XKL5 378 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 ZNF280DQ6N043 979 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 C1orf228Q6PIY5 440 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 RHBDF2Q6PJF5 856 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 VSTM1Q6UX27 236 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 LRRTM3Q86VH5 581 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 CEP57Q86XR8 500 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 SCN4BQ8IWT1 228 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 PPIL6Q8IXY8 311 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 ARHGAP18Q8N392 663 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 ZCCHC9Q8N567 271 aaKnown RBP7□□□□□ -1.29
SLIRP-204ENST00000555890 ARFGAP2Q8N6H7 521 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 CCDC185Q8N715 623 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 PQLC3Q8N755 202 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 PLD5Q8N7P1 536 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 OR10T2Q8NGX3 314 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 PCDH19Q8TAB3 1148 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 SLC7A14Q8TBB6 771 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 NDRG1Q92597 394 aaKnown RBP7□□□□□ -1.29
SLIRP-204ENST00000555890 NTAN1Q96AB6 310 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 FAF2Q96CS3 445 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 PGAP3Q96FM1 320 aaPredicted RBP7□□□□□ -1.29
SLIRP-204ENST00000555890 ATP6V1G3Q96LB4 118 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 CASD1Q96PB1 797 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 CCDC77Q9BR77 488 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 TMEM121Q9BTD3 319 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 RAB6CQ9H0N0 254 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 STMN4Q9H169 189 aaPredicted RBP7□□□□□ -1.29
SLIRP-204ENST00000555890 CENPHQ9H3R5 247 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 NRDE2Q9H7Z3 1164 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 FAM204AQ9H8W3 233 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 TMBIM4Q9HC24 238 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 TMLHEQ9NVH6 421 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 COX16Q9P0S2 106 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 SAE1Q9UBE0 346 aaPredicted RBP7□□□□□ -1.29
SLIRP-204ENST00000555890 DNAJB4Q9UDY4 337 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 ADAM21Q9UKJ8 722 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 ADAM28Q9UKQ2 775 aa7□□□□□ -1.29
SLIRP-204ENST00000555890 FZD10Q9ULW2 581 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms