RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 IQUBQ8NA54 791 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 TSEN2Q8NCE0 465 aaKnown RBP9.34□□□□□ -0.91
PRKCH-218ENST00000555628 OR52K2Q8NGK3 314 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 WDR36Q8NI36 951 aaKnown RBP9.34□□□□□ -0.91
PRKCH-218ENST00000555628 DQX1Q8TE96 717 aaKnown RBP9.34□□□□□ -0.91
PRKCH-218ENST00000555628 CLEC4CQ8WTT0 213 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 EEF2KMTQ96G04 330 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 BMFQ96LC9 184 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 PRMT1Q99873 361 aaKnown RBP9.34□□□□□ -0.91
PRKCH-218ENST00000555628 MYOCQ99972 504 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 DUSP23Q9BVJ7 150 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 IMPG2Q9BZV3 1241 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 TMEM8AQ9HCN3 771 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 PNMA8BQ9ULN7 279 aaPredicted RBP9.34□□□□□ -0.91
PRKCH-218ENST00000555628 MTMR6Q9Y217 621 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 TLR6Q9Y2C9 796 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.34□□□□□ -0.91
PRKCH-218ENST00000555628 CSNK1G3Q9Y6M4 447 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 LRP4O75096 1905 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 CCDC187A0A096LP49 1063 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 SPTY2D1-AS1A0A0U1RR47 76 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 MCF2LO15068 1137 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 SLC31A1O15431 190 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 BNIP3LO60238 219 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 PPP6R2O75170 966 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 IGLV3-25P01717 112 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 CENPBP07199 599 aaPredicted RBP9.33□□□□□ -0.92
PRKCH-218ENST00000555628 SETSIPP0DME0 302 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 SYT1P21579 422 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 HNRNPA2B1P22626 353 aaKnown RBP9.33□□□□□ -0.92
PRKCH-218ENST00000555628 SLC5A2P31639 672 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 TBX4P57082 545 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 HNRNPKP61978 463 aaKnown RBP eCLIP9.33□□□□□ -0.92
PRKCH-218ENST00000555628 SERINC3Q13530 473 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 TBR1Q16650 682 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 CRTC2Q53ET0 693 aaPredicted RBP9.33□□□□□ -0.92
PRKCH-218ENST00000555628 SGO2Q562F6 1265 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 ZNF542PQ5EBM4 170 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 SEL1L3Q68CR1 1132 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 PMF1Q6P1K2 205 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 KYAT3Q6YP21 454 aaKnown RBP9.33□□□□□ -0.92
PRKCH-218ENST00000555628 HORMAD1Q86X24 394 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 SLC35F3Q8IY50 421 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 GRAMD1CQ8IYS0 662 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 ARL14Q8N4G2 192 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 TTC39CQ8N584 583 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 SLC35F5Q8WV83 523 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 OR8D1Q8WZ84 308 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 IRGQQ8WZA9 623 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 KLK6Q92876 244 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 IPO9Q96P70 1041 aaKnown RBP9.33□□□□□ -0.92
PRKCH-218ENST00000555628 CALN1Q9BXU9 219 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 ZCCHC2Q9C0B9 1178 aaKnown RBP9.33□□□□□ -0.92
PRKCH-218ENST00000555628 ZMYND15Q9H091 742 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 EPN3Q9H201 632 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 LRRC4Q9HBW1 653 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 GEMIN8Q9NWZ8 242 aaKnown RBP9.33□□□□□ -0.92
PRKCH-218ENST00000555628 SALL4Q9UJQ4 1053 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 MAN2B2Q9Y2E5 1009 aa9.33□□□□□ -0.92
PRKCH-218ENST00000555628 FAM181BA6NEQ2 426 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 POM121BA6NF01 834 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 NEMP2A6NFY4 417 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 TPP1O14773 563 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 PLD2O14939 933 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 RAD51BO15315 384 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 POLR2DO15514 142 aaKnown RBP9.32□□□□□ -0.92
PRKCH-218ENST00000555628 LTFP02788 710 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 GTF2H1P32780 548 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 NOS2P35228 1153 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 RPL34P49207 117 aaKnown RBP9.32□□□□□ -0.92
PRKCH-218ENST00000555628 NUMBP49757 651 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 IRAK1P51617 712 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 SLC12A1Q13621 1099 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 ZCWPW2Q504Y3 356 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 HS1BP3Q53T59 392 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 ARTNQ5T4W7 220 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 FAM46CQ5VWP2 391 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 CEP135Q66GS9 1140 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 OR6B2Q6IFH4 312 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 CRTC1Q6UUV9 634 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 Q6ZSR6 202 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 INTS8Q75QN2 995 aaKnown RBP9.32□□□□□ -0.92
PRKCH-218ENST00000555628 DSG4Q86SJ6 1040 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 TAC4Q86UU9 113 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 CIR1Q86X95 450 aaPredicted RBP9.32□□□□□ -0.92
PRKCH-218ENST00000555628 DTX1Q86Y01 620 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 SIX6OS1Q8N1H7 587 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 UBA3Q8TBC4 463 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 TFAP2BQ92481 460 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 VOPP1Q96AW1 172 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 KLF6Q99612 283 aaPredicted RBP9.32□□□□□ -0.92
PRKCH-218ENST00000555628 ABCG4Q9H172 646 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 TSPAN10Q9H1Z9 355 aaPredicted RBP9.32□□□□□ -0.92
PRKCH-218ENST00000555628 NDFIP2Q9NV92 336 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 DNAJC28Q9NX36 388 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 NCKIPSDQ9NZQ3 722 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 ZFC3H1O60293 1989 aaKnown RBP9.32□□□□□ -0.92
PRKCH-218ENST00000555628 OTOGQ6ZRI0 2925 aa9.32□□□□□ -0.92
PRKCH-218ENST00000555628 SDK2Q58EX2 2172 aa9.31□□□□□ -0.92
PRKCH-218ENST00000555628 A0A1W2PNR3 127 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms