RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 GPR153Q6NV75 609 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 EMBQ6PCB8 327 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 ADIPOR2Q86V24 386 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 HOOK3Q86VS8 718 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 ZCCHC9Q8N567 271 aaKnown RBP10.37□□□□□ -0.75
SRP54-208ENST00000555557 SORCS1Q8WY21 1168 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 HLA-CQ95604 372 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 EXOC4Q96A65 974 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 ZNF599Q96NL3 588 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 XPO6Q96QU8 1125 aaKnown RBP10.37□□□□□ -0.75
SRP54-208ENST00000555557 FCRL5Q96RD9 977 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 APOL2Q9BQE5 337 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 ZNF446Q9NWS9 450 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 FBXO10Q9UK96 956 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 SHOC2Q9UQ13 582 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 TMCC1O94876 653 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 CD86P42081 329 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 MAGEA6P43360 314 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 DGKGP49619 791 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 PLK1P53350 603 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 HTR4Q13639 388 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 FASTKD3Q14CZ7 662 aaKnown RBP10.37□□□□□ -0.75
SRP54-208ENST00000555557 AAK1Q2M2I8 961 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 ZNF534Q76KX8 674 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 TMC3Q7Z5M5 1100 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 PRPF39Q86UA1 669 aaKnown RBP10.37□□□□□ -0.75
SRP54-208ENST00000555557 CAND1Q86VP6 1230 aaKnown RBP10.37□□□□□ -0.75
SRP54-208ENST00000555557 ETFBKMTQ8IXQ9 262 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 ARRDC2Q8TBH0 407 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.37□□□□□ -0.75
SRP54-208ENST00000555557 CAVIN3Q969G5 261 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 ACDQ96AP0 544 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 NSMCE3Q96MG7 304 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 SERPINB12Q96P63 405 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 SEMA3CQ99985 751 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 CINPQ9BW66 212 aaPredicted RBP10.37□□□□□ -0.75
SRP54-208ENST00000555557 LIMD1Q9UGP4 676 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 SEPT3Q9UH03 358 aa10.37□□□□□ -0.75
SRP54-208ENST00000555557 CHD5Q8TDI0 1954 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 ANHXE9PGG2 379 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 PMPCBO75439 489 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 MMP2P08253 660 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 TPSB2P20231 275 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 GJA4P35212 333 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 SOX9P48436 509 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 SCNN1BP51168 640 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 CBX1P83916 185 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 PDIA2Q13087 525 aaKnown RBP10.36□□□□□ -0.75
SRP54-208ENST00000555557 SLC12A1Q13621 1099 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 PRPSAP1Q14558 356 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 TPSAB1Q15661 275 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 PCSK7Q16549 785 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 HIF1AQ16665 826 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 MBLAC2Q68D91 279 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 KCTD11Q693B1 232 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 RETSATQ6NUM9 610 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 MTSS1LQ765P7 747 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 ANKMY2Q8IV38 441 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 SFTPA1Q8IWL2 248 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 AGGF1Q8N302 714 aaeCLIP10.36□□□□□ -0.75
SRP54-208ENST00000555557 ATP11CQ8NB49 1132 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 IPMKQ8NFU5 416 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 CYB5D2Q8WUJ1 264 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 CHFRQ96EP1 664 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 IMP4Q96G21 291 aaKnown RBP10.36□□□□□ -0.75
SRP54-208ENST00000555557 PSKH2Q96QS6 385 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 SLC2A11Q9BYW1 496 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 FAM129AQ9BZQ8 928 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 TM6SF2Q9BZW4 377 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 POLR1EQ9GZS1 481 aaKnown RBP10.36□□□□□ -0.75
SRP54-208ENST00000555557 SLC25A51Q9H1U9 297 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 SEMA4AQ9H3S1 761 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 SAYSD1Q9NPB0 183 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 SLCO3A1Q9UIG8 710 aa10.36□□□□□ -0.75
SRP54-208ENST00000555557 ANTXRLA6NF34 631 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 ARNTLO00327 626 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 AP2A1O95782 977 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 AGTP01019 485 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 SERPINH1P50454 418 aaKnown RBP10.35□□□□□ -0.75
SRP54-208ENST00000555557 PMS2P54278 862 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 TFF2Q03403 129 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 KDSRQ06136 332 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 NR1H3Q13133 447 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 RFTN1Q14699 578 aaPredicted RBP10.35□□□□□ -0.75
SRP54-208ENST00000555557 BBS9Q3SYG4 887 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 INO80DQ53TQ3 878 aaPredicted RBP10.35□□□□□ -0.75
SRP54-208ENST00000555557 ATXN7L2Q5T6C5 722 aaPredicted RBP10.35□□□□□ -0.75
SRP54-208ENST00000555557 KIAA0907Q7Z7F0 614 aaPredicted RBP10.35□□□□□ -0.75
SRP54-208ENST00000555557 AHI1Q8N157 1196 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 BBS5Q8N3I7 341 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 CPA6Q8N4T0 437 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 OR52K1Q8NGK4 314 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 OR6K2Q8NGY2 324 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 NXPE3Q969Y0 559 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 C9orf72Q96LT7 481 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 MGME1Q9BQP7 344 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 WDR83Q9BRX9 315 aaKnown RBP10.35□□□□□ -0.75
SRP54-208ENST00000555557 TXLNGYQ9BZA5 131 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 CIPCQ9C0C6 399 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 TNKS2Q9H2K2 1166 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms