RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 ARHGAP25P42331 645 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 MAGEA1P43355 309 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 NOP2P46087 812 aaKnown RBP12.32□□□□□ -0.44
SRP54-206ENST00000555317 ID4P47928 161 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 CCNHP51946 323 aaPredicted RBP12.32□□□□□ -0.44
SRP54-206ENST00000555317 RHOAP61586 193 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 DPYSQ14117 519 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 RSPO4Q2I0M5 234 aaPredicted RBP12.32□□□□□ -0.44
SRP54-206ENST00000555317 TBC1D3GQ6DHY5 549 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 TBC1D3CQ6IPX1 549 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 NCEH1Q6PIU2 408 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 TMTC1Q8IUR5 882 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 TBC1D3Q8IZP1 549 aaPredicted RBP12.32□□□□□ -0.44
SRP54-206ENST00000555317 ZCCHC9Q8N567 271 aaKnown RBP12.32□□□□□ -0.44
SRP54-206ENST00000555317 OR2T34Q8NGX1 318 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 GDAP1L1Q96MZ0 367 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 CSPG4P5Q96PW8 444 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 HEPHQ9BQS7 1158 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 CALN1Q9BXU9 219 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 NOL6Q9H6R4 1146 aaKnown RBP12.32□□□□□ -0.44
SRP54-206ENST00000555317 PCDH18Q9HCL0 1135 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 OSGEPQ9NPF4 335 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 TMEM74BQ9NUR3 256 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 RCOR3Q9P2K3 495 aaPredicted RBP12.32□□□□□ -0.44
SRP54-206ENST00000555317 HECAQ9UBI9 543 aaPredicted RBP12.32□□□□□ -0.44
SRP54-206ENST00000555317 EIF2B4Q9UI10 523 aaKnown RBP12.32□□□□□ -0.44
SRP54-206ENST00000555317 TPX2Q9ULW0 747 aaKnown RBP12.32□□□□□ -0.44
SRP54-206ENST00000555317 A0A1B0GTW7 788 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 LNP1A1A4G5 178 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 PATE3B3GLJ2 98 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 KRIT1O00522 736 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 BCAT2O15382 392 aaPredicted RBP12.31□□□□□ -0.44
SRP54-206ENST00000555317 LEFTY1O75610 366 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 SYPP08247 313 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 SERPINF2P08697 491 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 MAOBP27338 520 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 CDC25BP30305 580 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 PAPOLAP51003 745 aaKnown RBP12.31□□□□□ -0.44
SRP54-206ENST00000555317 ADPRHP54922 357 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 CNTN1Q12860 1018 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 PDK2Q15119 407 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 TEAD4Q15561 434 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 INO80DQ53TQ3 878 aaPredicted RBP12.31□□□□□ -0.44
SRP54-206ENST00000555317 ARSIQ5FYB1 569 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 PEAR1Q5VY43 1037 aaPredicted RBP12.31□□□□□ -0.44
SRP54-206ENST00000555317 KIAA0895LQ68EN5 471 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 SLC23A3Q6PIS1 610 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 POLNQ7Z5Q5 900 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 ADAT2Q7Z6V5 191 aaKnown RBP12.31□□□□□ -0.44
SRP54-206ENST00000555317 SPC24Q8NBT2 197 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 CHST14Q8NCH0 376 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 OR2AP1Q8NGE2 309 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 NSMCE1Q8WV22 266 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 GTPBP2Q9BX10 602 aaKnown RBP12.31□□□□□ -0.44
SRP54-206ENST00000555317 LRRC19Q9H756 370 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 TMEM9BQ9NQ34 198 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 IMPACTQ9P2X3 320 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 SARDHQ9UL12 918 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 SLC6A14Q9UN76 642 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.31□□□□□ -0.44
SRP54-206ENST00000555317 ACTL7AQ9Y615 435 aa12.31□□□□□ -0.44
SRP54-206ENST00000555317 PLK4O00444 970 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 SPOPO43791 374 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 GDF9O60383 454 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 PRAMEF11O60813 436 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 ABCB7O75027 752 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 PALMO75781 387 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 MTA2O94776 668 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 POP4O95707 220 aaKnown RBP12.3□□□□□ -0.44
SRP54-206ENST00000555317 CTSLP07711 333 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 AMPD1P23109 780 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 ITGB7P26010 798 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 CD27P26842 260 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 DRD3P35462 400 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 MAPK8P45983 427 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 AFF3P51826 1226 aaKnown RBP12.3□□□□□ -0.44
SRP54-206ENST00000555317 IRX4P78413 519 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 PUM1Q14671 1186 aaKnown RBP eCLIP12.3□□□□□ -0.44
SRP54-206ENST00000555317 CFAP58Q5T655 872 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 ATXN7L2Q5T6C5 722 aaPredicted RBP12.3□□□□□ -0.44
SRP54-206ENST00000555317 STPG1Q5TH74 334 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 TXNRD3NBQ6F5E7 133 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 FBXL19Q6PCT2 694 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 PLPP6Q8IY26 295 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 TXLNBQ8N3L3 684 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 ATPAF2Q8N5M1 289 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 PAF1Q8N7H5 531 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 OR6K2Q8NGY2 324 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 DNASE2BQ8WZ79 361 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 BIRC7Q96CA5 298 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 LRIG1Q96JA1 1093 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 CINPQ9BW66 212 aaPredicted RBP12.3□□□□□ -0.44
SRP54-206ENST00000555317 OSBPL1AQ9BXW6 950 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 SLC39A8Q9C0K1 460 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 KLC2Q9H0B6 622 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 KDM4CQ9H3R0 1056 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 KLHL11Q9NVR0 708 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 PCDHA13Q9Y5I0 950 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 SHROOM3Q8TF72 1996 aa12.3□□□□□ -0.44
SRP54-206ENST00000555317 ADAMTS9Q9P2N4 1935 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms