RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 PFKPQ01813 784 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 RHDQ02161 417 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 PRKAA1Q13131 559 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 PEX6Q13608 980 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 GK3PQ14409 553 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 GPR162Q16538 588 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 XKR4Q5GH76 650 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 KCNT2Q6UVM3 1135 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 LIMS2Q7Z4I7 341 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 CLEC14AQ86T13 490 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 GPR180Q86V85 440 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 ZNF354CQ86Y25 554 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 GALNT4Q8N4A0 578 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 EFCAB3Q8N7B9 438 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 CNDP2Q96KP4 475 aaKnown RBP10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 KCTD15Q96SI1 283 aaPredicted RBP10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 DOK1Q99704 481 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 EIF2AQ9BY44 585 aaKnown RBP10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 IL22Q9GZX6 179 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 DRC3Q9H069 523 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 OLAHQ9NV23 265 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 SETD4Q9NVD3 440 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 AP4S1Q9Y587 144 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 NME7Q9Y5B8 376 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 FNDC1Q4ZHG4 1894 aaPredicted RBP10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 A0A0A0MRY4 1105 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 TRIM64BA6NI03 449 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 RNASEH2AO75792 299 aaKnown RBP10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 RECQL4O94761 1208 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 C7P10643 843 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 SERPINB5P36952 375 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 MLH1P40692 756 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 MATKP42679 507 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 MS4A2Q01362 244 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 GBE1Q04446 702 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 TRIM25Q14258 630 aaKnown RBP10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 GRB14Q14449 540 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 CYTH1Q15438 398 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 MAPRE2Q15555 327 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 SLC25A52Q3SY17 297 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 GRAMD4Q6IC98 578 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 APPL2Q8NEU8 664 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 SNRNP27Q8WVK2 155 aaKnown RBP10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 HTR3CQ8WXA8 447 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 C18orf25Q96B23 403 aaPredicted RBP10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 RCN3Q96D15 328 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 SPATA13Q96N96 652 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 KLHL32Q96NJ5 620 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 OR52B2Q96RD2 323 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 RBBP8Q99708 897 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 TINF2Q9BSI4 451 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 B3GNT5Q9BYG0 378 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 SNX15Q9NRS6 342 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 MTMR10Q9NXD2 777 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 ARHGEF38Q9NXL2 777 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 TMEM9Q9P0T7 183 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 SARDHQ9UL12 918 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 FZD10Q9ULW2 581 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 CDYLQ9Y232 598 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 ANKRD6Q9Y2G4 727 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 TMED5Q9Y3A6 229 aa10.85□□□□□ -0.67
MTHFD1-210ENST00000555252 WDR27A2RRH5 827 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 C7orf72A4D263 438 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 MBLAC1A4D2B0 266 aaPredicted RBP10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 SOBPA7XYQ1 873 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 G3V2L1 256 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 MAGEB3O15480 346 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 SUPT3HO75486 399 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 DAB1O75553 588 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 ESRRBO95718 433 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 POLBP06746 335 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 CYP2C9P11712 490 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 LCP1P13796 627 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 WARSP23381 471 aaKnown RBP10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 ADORA2BP29275 332 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 SLC7A1P30825 629 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 ENTPD1P49961 510 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 LIMK2P53671 638 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 OXCT1P55809 520 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 GSTM4Q03013 218 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 RELAQ04206 551 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 LSM12Q3MHD2 195 aaKnown RBP10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 NCBP2-AS2Q69YL0 99 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 GPR142Q7Z601 462 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 TOP6BLQ8N6T0 577 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 ANKFN1Q8N957 763 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 MFSD2AQ8NA29 543 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 MAPK15Q8TD08 544 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 GIPC3Q8TF64 312 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 SLC35B4Q969S0 331 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 ISOC1Q96CN7 298 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 HNRNPABQ99729 332 aaKnown RBP10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 TMEM79Q9BSE2 394 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 FAM49AQ9H0Q0 323 aaPredicted RBP10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 DPEP3Q9H4B8 488 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 MRM3Q9HC36 420 aaKnown RBP10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 OXSMQ9NWU1 459 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 DTLQ9NZJ0 730 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 GNPTGQ9UJJ9 305 aa10.84□□□□□ -0.67
MTHFD1-210ENST00000555252 USP3Q9Y6I4 520 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms