RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 MTBPQ96DY7 904 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 ZNF778Q96MU6 729 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 SMC6Q96SB8 1091 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 RAD9AQ99638 391 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 MGME1Q9BQP7 344 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 TMEM106CQ9BVX2 250 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 MCOLN1Q9GZU1 580 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 IL1RAPL1Q9NZN1 696 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 SLC17A7Q9P2U7 560 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 MAD1L1Q9Y6D9 718 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 HIDE1A8MVS5 230 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 POLBP06746 335 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 ALADP13716 330 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 CNTFP26441 200 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 OR1E1P30953 314 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 BMPR1AP36894 532 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 EPHB3P54753 998 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 GNA12Q03113 381 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 MGAT5Q09328 741 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 PRPSAP1Q14558 356 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 PDK4Q16654 411 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 CES3Q6UWW8 571 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 SETD3Q86TU7 594 aaPredicted RBP9.04□□□□□ -0.96
TDP1-210ENST00000554976 PPM1NQ8N819 430 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.04□□□□□ -0.96
TDP1-210ENST00000554976 SPPL3Q8TCT6 385 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 PTCD2Q8WV60 388 aaKnown RBP9.04□□□□□ -0.96
TDP1-210ENST00000554976 RABEP2Q9H5N1 569 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 ENTPD7Q9NQZ7 604 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 CHRAC1Q9NRG0 131 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 ACTL7AQ9Y615 435 aa9.04□□□□□ -0.96
TDP1-210ENST00000554976 ILVBLA1L0T0 632 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 MROH6A6NGR9 719 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 TRIM49D1C9J1S8 452 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 INHBAP08476 426 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 SNRPAP09012 282 aaKnown RBP9.03□□□□□ -0.96
TDP1-210ENST00000554976 PFKLP17858 780 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 KRT15P19012 456 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 CCR2P41597 374 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 SERPINB9P50453 376 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 RENBPP51606 427 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 RPS24P62847 133 aaKnown RBP9.03□□□□□ -0.96
TDP1-210ENST00000554976 DSC2Q02487 901 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 CES4AQ5XG92 561 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 ZNF783Q6ZMS7 281 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 ITIH5Q86UX2 942 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 RIN3Q8TB24 985 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 TCP10LQ8TDR4 215 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 MRRFQ96E11 262 aaKnown RBP9.03□□□□□ -0.96
TDP1-210ENST00000554976 MFSD3Q96ES6 412 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 CYP2S1Q96SQ9 504 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 RBBP8Q99708 897 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 APOL2Q9BQE5 337 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 FICDQ9BVA6 458 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 MLXIPLQ9NP71 852 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 EMCNQ9ULC0 261 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 TCAF1Q9Y4C2 921 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 LINC01553A4QN01 128 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 PRRG1O14668 218 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 CLDN11O75508 207 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 IL1BP01584 269 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 SPATA31D3P0C874 917 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 ERVK-10P10266 1014 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 PYGBP11216 843 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 GLDCP23378 1020 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 CHRNA4P43681 627 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 CCT5P48643 541 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 SLC11A2P49281 568 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 HARS2P49590 506 aaKnown RBP9.03□□□□□ -0.96
TDP1-210ENST00000554976 CORO7P57737 925 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 ARF5P84085 180 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 ACVR1Q04771 509 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 VEPH1Q14D04 833 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 PCID2Q5JVF3 399 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 TMCO4Q5TGY1 634 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 PKN3Q6P5Z2 889 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 SPATA31D4Q6ZUB0 917 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 HTR3DQ70Z44 454 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 MRPL43Q8N983 215 aaKnown RBP9.03□□□□□ -0.96
TDP1-210ENST00000554976 ANKRD42Q8N9B4 389 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 SLC22A17Q8WUG5 538 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 C12orf65Q9H3J6 166 aaKnown RBP9.03□□□□□ -0.96
TDP1-210ENST00000554976 VPS45Q9NRW7 570 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 PLXNB3Q9ULL4 1909 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 RPS6KL1Q9Y6S9 549 aa9.03□□□□□ -0.96
TDP1-210ENST00000554976 A0A1B0GVM2 712 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 TCAF2A6NFQ2 919 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 TPH1P17752 444 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 DNAJC3Q13217 504 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 BMPR2Q13873 1038 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 CYTH1Q15438 398 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 RABGAP1LQ5R372 815 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 STXBP5Q5T5C0 1151 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 MARC1Q5VT66 337 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 TXNDC8Q6A555 127 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 MICALCLQ6ZW33 695 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 RTL10Q7L3V2 364 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 CLEC14AQ86T13 490 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 CPXM2Q8N436 756 aa9.02□□□□□ -0.96
TDP1-210ENST00000554976 GDAP1Q8TB36 358 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms