RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 BROXQ5VW32 411 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 NAA35Q5VZE5 725 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 TRIM72Q6ZMU5 477 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 C4orf50Q6ZRC1 276 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 CLEC20AQ6ZU45 233 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 SPATA2LQ8IUW3 424 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-212ENST00000554486 CCDC170Q8IYT3 715 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 CLRN3Q8NCR9 226 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 TMEM35BQ8NCS4 154 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 C1orf131Q8NDD1 294 aaKnown RBP6.6□□□□□ -1.35
SCFD1-212ENST00000554486 ATL2Q8NHH9 583 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 SLC35F5Q8WV83 523 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 SECISBP2LQ93073 1101 aaKnown RBP6.6□□□□□ -1.35
SCFD1-212ENST00000554486 SMARCD1Q96GM5 515 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 FUBP3Q96I24 572 aaKnown RBP eCLIP6.6□□□□□ -1.35
SCFD1-212ENST00000554486 CCDC42Q96M95 316 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 PGLYRP2Q96PD5 576 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 KCNC2Q96PR1 638 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 MED10Q9BTT4 135 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.6□□□□□ -1.35
SCFD1-212ENST00000554486 DUSP16Q9BY84 665 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 DNAI2Q9GZS0 605 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 TTYH1Q9H313 450 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-212ENST00000554486 CSNK1G1Q9HCP0 422 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 SEPT11Q9NVA2 429 aaKnown RBP6.6□□□□□ -1.35
SCFD1-212ENST00000554486 UCKL1Q9NWZ5 548 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 AFF4Q9UHB7 1163 aaKnown RBP6.6□□□□□ -1.35
SCFD1-212ENST00000554486 PYCARDQ9ULZ3 195 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 APOBEC2Q9Y235 224 aaKnown RBP6.6□□□□□ -1.35
SCFD1-212ENST00000554486 SSX2IPQ9Y2D8 614 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 REXO2Q9Y3B8 237 aaKnown RBP6.6□□□□□ -1.35
SCFD1-212ENST00000554486 EPN1Q9Y6I3 576 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-212ENST00000554486 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.6□□□□□ -1.35
SCFD1-212ENST00000554486 PMF1-BGLAPU3KQ54 211 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 BRWD1Q9NSI6 2320 aa6.6□□□□□ -1.35
SCFD1-212ENST00000554486 ATP8B3O60423 1300 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 TMCO5BA8MYB1 307 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 EIF3CLB5ME19 914 aaKnown RBP6.59□□□□□ -1.35
SCFD1-212ENST00000554486 HHLA1C9JL84 531 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 F8VP50 259 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 XPO1O14980 1071 aaKnown RBP6.59□□□□□ -1.35
SCFD1-212ENST00000554486 ARHGAP6O43182 974 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 AKR1B10O60218 316 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 RTN2O75298 545 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 SOAT2O75908 522 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 NDUFA10O95299 355 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 FAM200BP0CF97 657 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 SETSIPP0DME0 302 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 HAPLN1P10915 354 aaPredicted RBP6.59□□□□□ -1.35
SCFD1-212ENST00000554486 GZMAP12544 262 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 HOXA5P20719 270 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 CA8P35219 290 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 CYLC1P35663 651 aaPredicted RBP6.59□□□□□ -1.35
SCFD1-212ENST00000554486 MAGEA11P43364 429 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 RPL34P49207 117 aaKnown RBP6.59□□□□□ -1.35
SCFD1-212ENST00000554486 GPR15P49685 360 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 RGS7P49802 495 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 NDUFV1P49821 464 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 MAP3K7CLP57077 242 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 TMPRSS15P98073 1019 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 GFPT1Q06210 699 aaPredicted RBP6.59□□□□□ -1.35
SCFD1-212ENST00000554486 ADCY1Q08828 1119 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 PDCLQ13371 301 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 SMAD4Q13485 552 aaKnown RBP6.59□□□□□ -1.35
SCFD1-212ENST00000554486 LRRC32Q14392 662 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 VMACQ2NL98 169 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 CFAP221Q4G0U5 840 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 PTPN20Q4JDL3 420 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 CCDC122Q5T0U0 273 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 LCE1DQ5T752 114 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 TPGS2Q68CL5 300 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 VASNQ6EMK4 673 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 ACAD10Q6JQN1 1059 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 PMF1Q6P1K2 205 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 ALKBH5Q6P6C2 394 aaKnown RBP6.59□□□□□ -1.35
SCFD1-212ENST00000554486 TOGARAM2Q6ZUX3 1019 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 MON1BQ7L1V2 547 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 GPRIN1Q7Z2K8 1008 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 ADGRD2Q7Z7M1 963 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 VPS36Q86VN1 386 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 PHF13Q86YI8 300 aaPredicted RBP6.59□□□□□ -1.35
SCFD1-212ENST00000554486 KYQ8NBH2 561 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 ACRBPQ8NEB7 543 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 ZNF461Q8TAF7 563 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 SPPL2BQ8TCT7 592 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 COG1Q8WTW3 980 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 C2orf15Q8WU43 125 aaKnown RBP6.59□□□□□ -1.35
SCFD1-212ENST00000554486 SLC22A17Q8WUG5 538 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 ZSWIM3Q96MP5 696 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 CPXM1Q96SM3 734 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 KCNK16Q96T55 309 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 EIF3CQ99613 913 aaKnown RBP6.59□□□□□ -1.35
SCFD1-212ENST00000554486 DESI2Q9BSY9 194 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 PACSIN1Q9BY11 444 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 LMAN2LQ9H0V9 348 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 ISCUQ9H1K1 167 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 PDCL3Q9H2J4 239 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 DEF6Q9H4E7 631 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 PCDH18Q9HCL0 1135 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 DLL4Q9NR61 685 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms