RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 PRAMEF11O60813 436 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 IL4RP24394 825 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 MAOBP27338 520 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 CNTN1Q12860 1018 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 DPYSL3Q14195 570 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 PDK2Q15119 407 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 WDR45BQ5MNZ6 344 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 TCEAL6Q6IPX3 200 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 MAP7D3Q8IWC1 876 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 TP53INP2Q8IXH6 220 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 OR14C36Q8NHC7 312 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 SNX19Q92543 992 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 TCEAL3Q969E4 200 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 HEPHQ9BQS7 1158 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 ZDHHC6Q9H6R6 413 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 SP110Q9HB58 689 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 PDFQ9HBH1 243 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 HYOU1Q9Y4L1 999 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 GVINP1Q7Z2Y8 2422 aa23.67■■□□□ 1.38
NEK9-203ENST00000553945 KHNYNO15037 678 aaKnown RBP23.66■■□□□ 1.38
NEK9-203ENST00000553945 FOXD2O60548 495 aaPredicted RBP23.66■■□□□ 1.38
NEK9-203ENST00000553945 LEFTY1O75610 366 aa23.66■■□□□ 1.38
NEK9-203ENST00000553945 FSBPO95073 299 aa23.66■■□□□ 1.38
NEK9-203ENST00000553945 GSRP00390 522 aa23.66■■□□□ 1.38
NEK9-203ENST00000553945 HADHBP55084 474 aaKnown RBP23.66■■□□□ 1.38
NEK9-203ENST00000553945 SNRPD1P62314 119 aaKnown RBP23.66■■□□□ 1.38
NEK9-203ENST00000553945 LMNB2Q03252 620 aa23.66■■□□□ 1.38
NEK9-203ENST00000553945 ATXN7L2Q5T6C5 722 aaPredicted RBP23.66■■□□□ 1.38
NEK9-203ENST00000553945 TMEM139Q8IV31 216 aa23.66■■□□□ 1.38
NEK9-203ENST00000553945 PLPP6Q8IY26 295 aa23.66■■□□□ 1.38
NEK9-203ENST00000553945 OR2AP1Q8NGE2 309 aa23.66■■□□□ 1.38
NEK9-203ENST00000553945 OR6K2Q8NGY2 324 aa23.66■■□□□ 1.38
NEK9-203ENST00000553945 MIR1-1HGQ9H1L0 117 aa23.66■■□□□ 1.38
NEK9-203ENST00000553945 DYRK4Q9NR20 520 aa23.66■■□□□ 1.38
NEK9-203ENST00000553945 REXO2Q9Y3B8 237 aaKnown RBP23.66■■□□□ 1.38
NEK9-203ENST00000553945 WASF2Q9Y6W5 498 aa23.66■■□□□ 1.38
NEK9-203ENST00000553945 NUMA1Q14980 2115 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 RCCD1A6NED2 376 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 LRRC72A6NJI9 287 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 RNF103O00237 685 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 KRIT1O00522 736 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 SPOPO43791 374 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 BUB1BO60566 1050 aaPredicted RBP23.65■■□□□ 1.38
NEK9-203ENST00000553945 TNNT1P13805 278 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 COMTP21964 271 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 HOXD12P35452 270 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 SLC1A1P43005 524 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 ADPRHP54922 357 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 RHOAP61586 193 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 CYTH1Q15438 398 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 AASDHQ4L235 1098 aaPredicted RBP23.65■■□□□ 1.38
NEK9-203ENST00000553945 PEAR1Q5VY43 1037 aaPredicted RBP23.65■■□□□ 1.38
NEK9-203ENST00000553945 NCEH1Q6PIU2 408 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 ARHGAP36Q6ZRI8 547 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 ACRBPQ8NEB7 543 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 OR2T34Q8NGX1 318 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 DNASE2BQ8WZ79 361 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 ARRDC3Q96B67 414 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 ZNF670Q9BS34 389 aa23.65■■□□□ 1.38
NEK9-203ENST00000553945 PTPRZ1P23471 2315 aaPredicted RBP23.65■■□□□ 1.38
NEK9-203ENST00000553945 A0A0A6YYK5 440 aaPredicted RBP23.64■■□□□ 1.37
NEK9-203ENST00000553945 IGSF6O95976 241 aa23.64■■□□□ 1.37
NEK9-203ENST00000553945 CFIP05156 583 aa23.64■■□□□ 1.37
NEK9-203ENST00000553945 GKP32189 559 aa23.64■■□□□ 1.37
NEK9-203ENST00000553945 SERPINB6P35237 376 aa23.64■■□□□ 1.37
NEK9-203ENST00000553945 MYLK3Q32MK0 819 aa23.64■■□□□ 1.37
NEK9-203ENST00000553945 ANKRD20A8PQ5CZ79 823 aa23.64■■□□□ 1.37
NEK9-203ENST00000553945 TRIM61Q5EBN2 209 aa23.64■■□□□ 1.37
NEK9-203ENST00000553945 KIAA0895LQ68EN5 471 aa23.64■■□□□ 1.37
NEK9-203ENST00000553945 PCDH19Q8TAB3 1148 aa23.64■■□□□ 1.37
NEK9-203ENST00000553945 CEP76Q8TAP6 659 aa23.64■■□□□ 1.37
NEK9-203ENST00000553945 RAPGEF5Q92565 580 aa23.64■■□□□ 1.37
NEK9-203ENST00000553945 BIRC7Q96CA5 298 aa23.64■■□□□ 1.37
NEK9-203ENST00000553945 PPP1R16AQ96I34 528 aa23.64■■□□□ 1.37
NEK9-203ENST00000553945 GDAP1L1Q96MZ0 367 aa23.64■■□□□ 1.37
NEK9-203ENST00000553945 IPO11Q9UI26 975 aaKnown RBP23.64■■□□□ 1.37
NEK9-203ENST00000553945 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.64■■□□□ 1.37
NEK9-203ENST00000553945 LRRD1A4D1F6 860 aa23.63■■□□□ 1.37
NEK9-203ENST00000553945 SLC7A4O43246 635 aa23.63■■□□□ 1.37
NEK9-203ENST00000553945 PALMO75781 387 aa23.63■■□□□ 1.37
NEK9-203ENST00000553945 POP4O95707 220 aaKnown RBP23.63■■□□□ 1.37
NEK9-203ENST00000553945 GNSP15586 552 aa23.63■■□□□ 1.37
NEK9-203ENST00000553945 KDELR1P24390 212 aa23.63■■□□□ 1.37
NEK9-203ENST00000553945 GSDMDP57764 484 aa23.63■■□□□ 1.37
NEK9-203ENST00000553945 IL10RBQ08334 325 aa23.63■■□□□ 1.37
NEK9-203ENST00000553945 DUOXA1Q1HG43 343 aa23.63■■□□□ 1.37
NEK9-203ENST00000553945 ODF2Q5BJF6 829 aa23.63■■□□□ 1.37
NEK9-203ENST00000553945 AGBL4Q5VU57 503 aa23.63■■□□□ 1.37
NEK9-203ENST00000553945 KIAA1328Q86T90 577 aa23.63■■□□□ 1.37
NEK9-203ENST00000553945 RHOT1Q8IXI2 618 aa23.63■■□□□ 1.37
NEK9-203ENST00000553945 EXOC2Q96KP1 924 aa23.63■■□□□ 1.37
NEK9-203ENST00000553945 GOLPH3Q9H4A6 298 aa23.63■■□□□ 1.37
NEK9-203ENST00000553945 LHX3Q9UBR4 397 aa23.63■■□□□ 1.37
NEK9-203ENST00000553945 EVLQ9UI08 416 aaPredicted RBP23.63■■□□□ 1.37
NEK9-203ENST00000553945 EIF2B4Q9UI10 523 aaKnown RBP23.63■■□□□ 1.37
NEK9-203ENST00000553945 TBC1D3DA0A087WVF3 549 aa23.62■■□□□ 1.37
NEK9-203ENST00000553945 TBC1D3IA0A087WXS9 549 aa23.62■■□□□ 1.37
NEK9-203ENST00000553945 TBC1D3EA0A087X179 549 aa23.62■■□□□ 1.37
NEK9-203ENST00000553945 TBC1D3KA0A087X1G2 549 aa23.62■■□□□ 1.37
NEK9-203ENST00000553945 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms