RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 CYTH4Q9UIA0 394 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 KNL1Q8NG31 2342 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 PKD1L2Q7Z442 2459 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 SPEGQ15772 3267 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 ZBED1O96006 694 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 RFC1P35251 1148 aaPredicted RBP16.4■□□□□ 0.22
ACTN1-209ENST00000553659 MATKP42679 507 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 BNC1Q01954 994 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 CALCOCO2Q13137 446 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 CAMK2GQ13555 558 aaPredicted RBP16.4■□□□□ 0.22
ACTN1-209ENST00000553659 PTK6Q13882 451 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 PPP1R7Q15435 360 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 HLA-BQ31612 363 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 MPPE1Q53F39 396 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 TFDP3Q5H9I0 405 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 OR6B2Q6IFH4 312 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 SPOCD1Q6ZMY3 1216 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 DBX2Q6ZNG2 339 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 CROCCP2Q86T23 111 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 SLCO6A1Q86UG4 719 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 CPNE8Q86YQ8 564 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 OR2T3Q8NH03 318 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 SETD7Q8WTS6 366 aaKnown RBP16.4■□□□□ 0.22
ACTN1-209ENST00000553659 SH3GL2Q99962 352 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 ST7Q9NRC1 585 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 TM7SF3Q9NS93 570 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 OLA1Q9NTK5 396 aaKnown RBP16.4■□□□□ 0.22
ACTN1-209ENST00000553659 WHRNQ9P202 907 aa16.4■□□□□ 0.22
ACTN1-209ENST00000553659 DMXL2Q8TDJ6 3036 aa16.39■□□□□ 0.21
ACTN1-209ENST00000553659 C7P10643 843 aa16.39■□□□□ 0.21
ACTN1-209ENST00000553659 ITIH2P19823 946 aa16.39■□□□□ 0.21
ACTN1-209ENST00000553659 HOXD9P28356 352 aaPredicted RBP16.39■□□□□ 0.21
ACTN1-209ENST00000553659 RPL34P49207 117 aaKnown RBP16.39■□□□□ 0.21
ACTN1-209ENST00000553659 HARS2P49590 506 aaKnown RBP16.39■□□□□ 0.21
ACTN1-209ENST00000553659 OGDHQ02218 1023 aa16.39■□□□□ 0.21
ACTN1-209ENST00000553659 SLMAPQ14BN4 828 aa16.39■□□□□ 0.21
ACTN1-209ENST00000553659 TTC27Q6P3X3 843 aa16.39■□□□□ 0.21
ACTN1-209ENST00000553659 BHLHA9Q7RTU4 235 aa16.39■□□□□ 0.21
ACTN1-209ENST00000553659 FAM124AQ86V42 546 aa16.39■□□□□ 0.21
ACTN1-209ENST00000553659 VSIG1Q86XK7 387 aa16.39■□□□□ 0.21
ACTN1-209ENST00000553659 CCDC89Q8N998 374 aa16.39■□□□□ 0.21
ACTN1-209ENST00000553659 UBA3Q8TBC4 463 aa16.39■□□□□ 0.21
ACTN1-209ENST00000553659 SLC35F5Q8WV83 523 aa16.39■□□□□ 0.21
ACTN1-209ENST00000553659 NDRG1Q92597 394 aaKnown RBP16.39■□□□□ 0.21
ACTN1-209ENST00000553659 GDAP1L1Q96MZ0 367 aa16.39■□□□□ 0.21
ACTN1-209ENST00000553659 TBCBQ99426 244 aa16.39■□□□□ 0.21
ACTN1-209ENST00000553659 TRIM51Q9BSJ1 452 aa16.39■□□□□ 0.21
ACTN1-209ENST00000553659 ULBP1Q9BZM6 244 aa16.39■□□□□ 0.21
ACTN1-209ENST00000553659 DPH5Q9H2P9 285 aa16.39■□□□□ 0.21
ACTN1-209ENST00000553659 PLA2G4CQ9UP65 541 aa16.39■□□□□ 0.21
ACTN1-209ENST00000553659 FNDC3AQ9Y2H6 1198 aaKnown RBP16.39■□□□□ 0.21
ACTN1-209ENST00000553659 HBS1LQ9Y450 684 aaKnown RBP16.39■□□□□ 0.21
ACTN1-209ENST00000553659 PCDHGB2Q9Y5G2 931 aa16.39■□□□□ 0.21
ACTN1-209ENST00000553659 MUC22E2RYF6 1773 aaPredicted RBP16.38■□□□□ 0.21
ACTN1-209ENST00000553659 TP53BP1Q12888 1972 aaPredicted RBP16.38■□□□□ 0.21
ACTN1-209ENST00000553659 GOLGA6L10A6NI86 522 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 E5RJQ4 531 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 H3BQF6 201 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 XPO1O14980 1071 aaKnown RBP16.38■□□□□ 0.21
ACTN1-209ENST00000553659 LRCH4O75427 683 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 GJB6O95452 261 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 HLA-EP13747 358 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 HLA-FP30511 346 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 GJC1P36383 396 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 GGCXP38435 758 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 EIF3BP55884 814 aaKnown RBP16.38■□□□□ 0.21
ACTN1-209ENST00000553659 SLC6A3Q01959 620 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 SLC25A11Q02978 314 aaKnown RBP16.38■□□□□ 0.21
ACTN1-209ENST00000553659 PDE4CQ08493 712 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 CACUL1Q86Y37 369 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 IQCKQ8N0W5 287 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 JOSD2Q8TAC2 188 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 BAHD1Q8TBE0 780 aaPredicted RBP16.38■□□□□ 0.21
ACTN1-209ENST00000553659 WFIKKN2Q8TEU8 576 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 TMA16Q96EY4 203 aaKnown RBP16.38■□□□□ 0.21
ACTN1-209ENST00000553659 FOXP3Q9BZS1 431 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 TMEM245Q9H330 911 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 CCDC86Q9H6F5 360 aaKnown RBP16.38■□□□□ 0.21
ACTN1-209ENST00000553659 LRRC4Q9HBW1 653 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 SFMBT1Q9UHJ3 866 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 STOML2Q9UJZ1 356 aa16.38■□□□□ 0.21
ACTN1-209ENST00000553659 DRG1Q9Y295 367 aaKnown RBP16.38■□□□□ 0.21
ACTN1-209ENST00000553659 WDFY3Q8IZQ1 3526 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 hCG_1818297A0A087WSY0 165 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 A0A1B0GVT2 93 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 TCRBV7S2A1N4TA0A589 114 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 LRRD1A4D1F6 860 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 C2CD4BA6NLJ0 364 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 A6NNZ2 444 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 TULP2O00295 520 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 FLRT2O43155 660 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 TSPAN3O60637 253 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 PPFIA2O75334 1257 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 SYF2O95926 243 aaKnown RBP16.37■□□□□ 0.21
ACTN1-209ENST00000553659 FAM153BP0C7A2 387 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 SDC4P31431 198 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 CSNK1EP49674 416 aaKnown RBP16.37■□□□□ 0.21
ACTN1-209ENST00000553659 AFF3P51826 1226 aaKnown RBP16.37■□□□□ 0.21
ACTN1-209ENST00000553659 TUBB8Q3ZCM7 444 aa16.37■□□□□ 0.21
ACTN1-209ENST00000553659 FAM153CQ494X1 144 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms